Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CiitaP79621 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CiitaP79621 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CiitaP79621 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CiitaP79621 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CiitaP79621 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CiitaP79621 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CiitaP79621 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CiitaP79621 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC13.38□□□□□ -0.27
CiitaP79621 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CiitaP79621 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC13.38□□□□□ -0.27
CiitaP79621 AY036118-201ENSMUST00000200021 923 ntBASIC13.38□□□□□ -0.27
CiitaP79621 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC13.38□□□□□ -0.27
CiitaP79621 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC13.38□□□□□ -0.27
CiitaP79621 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC13.38□□□□□ -0.27
CiitaP79621 AC107638.1-201ENSMUST00000213690 1061 ntBASIC13.38□□□□□ -0.27
CiitaP79621 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CiitaP79621 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.38□□□□□ -0.27
CiitaP79621 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CiitaP79621 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
CiitaP79621 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CiitaP79621 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CiitaP79621 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CiitaP79621 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CiitaP79621 Gm9361-201ENSMUST00000198695 1507 ntBASIC13.38□□□□□ -0.27
CiitaP79621 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CiitaP79621 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CiitaP79621 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
CiitaP79621 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CiitaP79621 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CiitaP79621 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CiitaP79621 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CiitaP79621 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CiitaP79621 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CiitaP79621 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CiitaP79621 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CiitaP79621 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CiitaP79621 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CiitaP79621 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CiitaP79621 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CiitaP79621 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CiitaP79621 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CiitaP79621 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC13.37□□□□□ -0.27
CiitaP79621 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
CiitaP79621 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
CiitaP79621 Gm14277-201ENSMUST00000121195 360 ntBASIC13.37□□□□□ -0.27
CiitaP79621 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC13.37□□□□□ -0.27
CiitaP79621 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CiitaP79621 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC13.37□□□□□ -0.27
CiitaP79621 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.37□□□□□ -0.27
CiitaP79621 Gm18711-201ENSMUST00000199341 750 ntBASIC13.37□□□□□ -0.27
CiitaP79621 Rps4l-202ENSMUST00000204242 789 ntBASIC13.37□□□□□ -0.27
CiitaP79621 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.37□□□□□ -0.27
CiitaP79621 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC13.37□□□□□ -0.27
CiitaP79621 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CiitaP79621 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CiitaP79621 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CiitaP79621 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CiitaP79621 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CiitaP79621 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CiitaP79621 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CiitaP79621 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CiitaP79621 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CiitaP79621 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CiitaP79621 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CiitaP79621 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CiitaP79621 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CiitaP79621 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CiitaP79621 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CiitaP79621 Gm18782-201ENSMUST00000209023 1399 ntBASIC13.36□□□□□ -0.27
CiitaP79621 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CiitaP79621 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CiitaP79621 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CiitaP79621 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CiitaP79621 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CiitaP79621 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
CiitaP79621 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CiitaP79621 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CiitaP79621 Gm12217-201ENSMUST00000118858 696 ntBASIC13.36□□□□□ -0.27
CiitaP79621 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC13.36□□□□□ -0.27
CiitaP79621 Gm25732-201ENSMUST00000175168 60 ntBASIC13.36□□□□□ -0.27
CiitaP79621 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
CiitaP79621 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CiitaP79621 Gm21027-201ENSMUST00000219300 1236 ntBASIC13.36□□□□□ -0.27
CiitaP79621 Mettl6-204ENSMUST00000227595 1027 ntBASIC13.36□□□□□ -0.27
CiitaP79621 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CiitaP79621 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CiitaP79621 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.36□□□□□ -0.27
CiitaP79621 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CiitaP79621 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CiitaP79621 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
CiitaP79621 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
CiitaP79621 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CiitaP79621 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CiitaP79621 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CiitaP79621 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CiitaP79621 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CiitaP79621 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CiitaP79621 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CiitaP79621 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms