Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Crnkl1P63154 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Crnkl1P63154 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Crnkl1P63154 Gm25927-201ENSMUST00000175058 117 ntBASIC12.24□□□□□ -0.45
Crnkl1P63154 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.24□□□□□ -0.45
Crnkl1P63154 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.24□□□□□ -0.45
Crnkl1P63154 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Crnkl1P63154 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Crnkl1P63154 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Crnkl1P63154 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.24□□□□□ -0.45
Crnkl1P63154 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.24□□□□□ -0.45
Crnkl1P63154 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Crnkl1P63154 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.24□□□□□ -0.45
Crnkl1P63154 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Crnkl1P63154 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Crnkl1P63154 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Crnkl1P63154 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Crnkl1P63154 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Crnkl1P63154 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Crnkl1P63154 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Crnkl1P63154 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Crnkl1P63154 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Crnkl1P63154 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Crnkl1P63154 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Crnkl1P63154 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Crnkl1P63154 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Crnkl1P63154 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Crnkl1P63154 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Crnkl1P63154 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Crnkl1P63154 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Crnkl1P63154 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Crnkl1P63154 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Crnkl1P63154 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Crnkl1P63154 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Crnkl1P63154 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Crnkl1P63154 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Crnkl1P63154 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Crnkl1P63154 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Crnkl1P63154 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Crnkl1P63154 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Crnkl1P63154 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Crnkl1P63154 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Crnkl1P63154 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Crnkl1P63154 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Crnkl1P63154 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Crnkl1P63154 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.23□□□□□ -0.45
Crnkl1P63154 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Crnkl1P63154 Cog3-203ENSMUST00000227473 4197 ntBASIC12.23□□□□□ -0.45
Crnkl1P63154 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.23□□□□□ -0.45
Crnkl1P63154 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.23□□□□□ -0.45
Crnkl1P63154 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Crnkl1P63154 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Crnkl1P63154 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Crnkl1P63154 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Crnkl1P63154 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Crnkl1P63154 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Crnkl1P63154 Gm5745-201ENSMUST00000183748 313 ntBASIC12.23□□□□□ -0.45
Crnkl1P63154 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.23□□□□□ -0.45
Crnkl1P63154 Gm7653-201ENSMUST00000214567 508 ntBASIC12.23□□□□□ -0.45
Crnkl1P63154 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.23□□□□□ -0.45
Crnkl1P63154 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.23□□□□□ -0.45
Crnkl1P63154 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Crnkl1P63154 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Crnkl1P63154 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Crnkl1P63154 Gm5161-201ENSMUST00000075243 853 ntBASIC12.23□□□□□ -0.45
Crnkl1P63154 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Crnkl1P63154 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Crnkl1P63154 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Crnkl1P63154 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Crnkl1P63154 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Crnkl1P63154 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Crnkl1P63154 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Crnkl1P63154 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Crnkl1P63154 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Crnkl1P63154 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Crnkl1P63154 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Crnkl1P63154 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Crnkl1P63154 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.22□□□□□ -0.45
Crnkl1P63154 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Crnkl1P63154 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Crnkl1P63154 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Crnkl1P63154 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Crnkl1P63154 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Crnkl1P63154 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Crnkl1P63154 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Crnkl1P63154 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Crnkl1P63154 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Crnkl1P63154 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Crnkl1P63154 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Crnkl1P63154 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Crnkl1P63154 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Crnkl1P63154 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Crnkl1P63154 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Crnkl1P63154 Gm11478-201ENSMUST00000117851 599 ntBASIC12.22□□□□□ -0.45
Crnkl1P63154 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.22□□□□□ -0.45
Crnkl1P63154 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Crnkl1P63154 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Crnkl1P63154 Gm27701-201ENSMUST00000184498 110 ntBASIC12.22□□□□□ -0.45
Crnkl1P63154 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Crnkl1P63154 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms