Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Gm43267-201ENSMUST00000199664 1796 ntBASIC13.92□□□□□ -0.18
Rrp1P56183 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rrp1P56183 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.92□□□□□ -0.18
Rrp1P56183 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.92□□□□□ -0.18
Rrp1P56183 Gm9083-201ENSMUST00000120423 819 ntBASIC13.92□□□□□ -0.18
Rrp1P56183 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rrp1P56183 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13.92□□□□□ -0.18
Rrp1P56183 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rrp1P56183 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.92□□□□□ -0.18
Rrp1P56183 Gm27486-201ENSMUST00000184923 80 ntBASIC13.92□□□□□ -0.18
Rrp1P56183 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.92□□□□□ -0.18
Rrp1P56183 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.92□□□□□ -0.18
Rrp1P56183 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC13.92□□□□□ -0.18
Rrp1P56183 Gm43172-201ENSMUST00000202139 2137 ntBASIC13.92□□□□□ -0.18
Rrp1P56183 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rrp1P56183 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC13.92□□□□□ -0.18
Rrp1P56183 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.92□□□□□ -0.18
Rrp1P56183 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rrp1P56183 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rrp1P56183 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rrp1P56183 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rrp1P56183 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Rrp1P56183 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC13.92□□□□□ -0.18
Rrp1P56183 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rrp1P56183 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Rrp1P56183 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rrp1P56183 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC13.92□□□□□ -0.18
Rrp1P56183 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rrp1P56183 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rrp1P56183 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rrp1P56183 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rrp1P56183 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Rrp1P56183 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rrp1P56183 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rrp1P56183 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rrp1P56183 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rrp1P56183 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rrp1P56183 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rrp1P56183 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.91□□□□□ -0.18
Rrp1P56183 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rrp1P56183 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rrp1P56183 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Rrp1P56183 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Rrp1P56183 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rrp1P56183 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rrp1P56183 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rrp1P56183 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rrp1P56183 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rrp1P56183 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rrp1P56183 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rrp1P56183 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Rrp1P56183 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rrp1P56183 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rrp1P56183 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.91□□□□□ -0.18
Rrp1P56183 Gm24644-201ENSMUST00000157114 139 ntBASIC13.91□□□□□ -0.18
Rrp1P56183 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.91□□□□□ -0.18
Rrp1P56183 Gm6007-201ENSMUST00000208170 823 ntBASIC13.91□□□□□ -0.18
Rrp1P56183 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.91□□□□□ -0.18
Rrp1P56183 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.91□□□□□ -0.18
Rrp1P56183 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.91□□□□□ -0.18
Rrp1P56183 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rrp1P56183 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rrp1P56183 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Rrp1P56183 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC13.91□□□□□ -0.18
Rrp1P56183 Gm43417-201ENSMUST00000201586 5207 ntBASIC13.91□□□□□ -0.18
Rrp1P56183 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rrp1P56183 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Rrp1P56183 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rrp1P56183 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Rrp1P56183 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.91□□□□□ -0.18
Rrp1P56183 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rrp1P56183 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.91□□□□□ -0.18
Rrp1P56183 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rrp1P56183 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rrp1P56183 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Rrp1P56183 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rrp1P56183 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rrp1P56183 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rrp1P56183 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Rrp1P56183 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rrp1P56183 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rrp1P56183 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rrp1P56183 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rrp1P56183 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rrp1P56183 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rrp1P56183 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.9□□□□□ -0.18
Rrp1P56183 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rrp1P56183 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.9□□□□□ -0.18
Rrp1P56183 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rrp1P56183 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.9□□□□□ -0.18
Rrp1P56183 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.9□□□□□ -0.18
Rrp1P56183 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rrp1P56183 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.9□□□□□ -0.18
Rrp1P56183 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.9□□□□□ -0.18
Rrp1P56183 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rrp1P56183 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rrp1P56183 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rrp1P56183 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rrp1P56183 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rrp1P56183 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms