Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.54□□□□□ -0.4
Ddx6P54823 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx6P54823 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx6P54823 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.54□□□□□ -0.4
Ddx6P54823 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx6P54823 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx6P54823 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx6P54823 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ddx6P54823 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx6P54823 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx6P54823 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx6P54823 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ddx6P54823 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.54□□□□□ -0.4
Ddx6P54823 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC12.54□□□□□ -0.4
Ddx6P54823 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.54□□□□□ -0.4
Ddx6P54823 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx6P54823 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx6P54823 Gm3332-201ENSMUST00000189337 928 ntBASIC12.54□□□□□ -0.4
Ddx6P54823 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Ddx6P54823 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.54□□□□□ -0.4
Ddx6P54823 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.54□□□□□ -0.4
Ddx6P54823 Gm4607-201ENSMUST00000206649 577 ntBASIC12.54□□□□□ -0.4
Ddx6P54823 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.54□□□□□ -0.4
Ddx6P54823 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx6P54823 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx6P54823 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx6P54823 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.54□□□□□ -0.4
Ddx6P54823 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx6P54823 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx6P54823 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx6P54823 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx6P54823 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx6P54823 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx6P54823 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx6P54823 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx6P54823 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx6P54823 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx6P54823 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx6P54823 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx6P54823 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.53□□□□□ -0.4
Ddx6P54823 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx6P54823 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx6P54823 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx6P54823 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Ddx6P54823 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ddx6P54823 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx6P54823 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx6P54823 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx6P54823 Gm24891-201ENSMUST00000104391 136 ntBASIC12.53□□□□□ -0.4
Ddx6P54823 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.53□□□□□ -0.4
Ddx6P54823 Gm14724-201ENSMUST00000118400 537 ntBASIC12.53□□□□□ -0.4
Ddx6P54823 Gm13045-201ENSMUST00000119019 712 ntBASIC12.53□□□□□ -0.4
Ddx6P54823 Gm7722-201ENSMUST00000120646 741 ntBASIC12.53□□□□□ -0.4
Ddx6P54823 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx6P54823 Mir1943-201ENSMUST00000158276 73 ntBASIC12.53□□□□□ -0.4
Ddx6P54823 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx6P54823 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ddx6P54823 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.53□□□□□ -0.4
Ddx6P54823 Gm24514-201ENSMUST00000174961 285 ntBASIC12.53□□□□□ -0.4
Ddx6P54823 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
Ddx6P54823 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.53□□□□□ -0.4
Ddx6P54823 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.53□□□□□ -0.4
Ddx6P54823 Gm6905-201ENSMUST00000205729 511 ntBASIC12.53□□□□□ -0.4
Ddx6P54823 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Ddx6P54823 Gm14267-206ENSMUST00000226870 1209 ntBASIC12.53□□□□□ -0.4
Ddx6P54823 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx6P54823 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx6P54823 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ddx6P54823 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx6P54823 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.53□□□□□ -0.4
Ddx6P54823 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx6P54823 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx6P54823 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ddx6P54823 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx6P54823 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx6P54823 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx6P54823 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx6P54823 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx6P54823 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx6P54823 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx6P54823 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx6P54823 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.52□□□□□ -0.4
Ddx6P54823 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ddx6P54823 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ddx6P54823 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ddx6P54823 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ddx6P54823 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ddx6P54823 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ddx6P54823 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ddx6P54823 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Ddx6P54823 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ddx6P54823 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Ddx6P54823 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ddx6P54823 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ddx6P54823 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ddx6P54823 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ddx6P54823 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.52□□□□□ -0.41
Ddx6P54823 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx6P54823 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx6P54823 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms