Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Gm18584-201ENSMUST00000203098 964 ntBASIC12.36□□□□□ -0.43
Fdft1P53798 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.36□□□□□ -0.43
Fdft1P53798 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fdft1P53798 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Fdft1P53798 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fdft1P53798 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fdft1P53798 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Fdft1P53798 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fdft1P53798 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fdft1P53798 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Fdft1P53798 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fdft1P53798 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fdft1P53798 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.36□□□□□ -0.43
Fdft1P53798 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fdft1P53798 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Fdft1P53798 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Fdft1P53798 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fdft1P53798 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fdft1P53798 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fdft1P53798 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fdft1P53798 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fdft1P53798 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.36□□□□□ -0.43
Fdft1P53798 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.36□□□□□ -0.43
Fdft1P53798 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fdft1P53798 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fdft1P53798 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fdft1P53798 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fdft1P53798 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Fdft1P53798 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Fdft1P53798 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Fdft1P53798 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Fdft1P53798 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Fdft1P53798 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Fdft1P53798 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Fdft1P53798 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Fdft1P53798 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Fdft1P53798 Gm13226-201ENSMUST00000117838 404 ntBASIC12.35□□□□□ -0.43
Fdft1P53798 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.35□□□□□ -0.43
Fdft1P53798 Gm11425-201ENSMUST00000119608 498 ntBASIC12.35□□□□□ -0.43
Fdft1P53798 Gm14660-201ENSMUST00000119809 575 ntBASIC12.35□□□□□ -0.43
Fdft1P53798 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.35□□□□□ -0.43
Fdft1P53798 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Fdft1P53798 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Fdft1P53798 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.35□□□□□ -0.43
Fdft1P53798 Gm45784-201ENSMUST00000188360 142 ntBASIC12.35□□□□□ -0.43
Fdft1P53798 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.35□□□□□ -0.43
Fdft1P53798 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Fdft1P53798 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.35□□□□□ -0.43
Fdft1P53798 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.35□□□□□ -0.43
Fdft1P53798 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Fdft1P53798 Gm9396-201ENSMUST00000076703 567 ntBASIC12.35□□□□□ -0.43
Fdft1P53798 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Fdft1P53798 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Fdft1P53798 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Fdft1P53798 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Fdft1P53798 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Fdft1P53798 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Fdft1P53798 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Fdft1P53798 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Fdft1P53798 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Fdft1P53798 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Fdft1P53798 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Fdft1P53798 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Fdft1P53798 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Fdft1P53798 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Fdft1P53798 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Fdft1P53798 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Fdft1P53798 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Fdft1P53798 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Fdft1P53798 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.34□□□□□ -0.43
Fdft1P53798 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.34□□□□□ -0.43
Fdft1P53798 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Fdft1P53798 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Fdft1P53798 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Fdft1P53798 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Fdft1P53798 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Fdft1P53798 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Fdft1P53798 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Fdft1P53798 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Fdft1P53798 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Fdft1P53798 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Fdft1P53798 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Fdft1P53798 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.34□□□□□ -0.43
Fdft1P53798 Gm7809-201ENSMUST00000153199 742 ntBASIC12.34□□□□□ -0.43
Fdft1P53798 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Fdft1P53798 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.34□□□□□ -0.43
Fdft1P53798 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Fdft1P53798 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Fdft1P53798 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Fdft1P53798 Gm5904-201ENSMUST00000210286 865 ntBASIC12.34□□□□□ -0.43
Fdft1P53798 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.34□□□□□ -0.43
Fdft1P53798 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Fdft1P53798 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.34□□□□□ -0.43
Fdft1P53798 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Fdft1P53798 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Fdft1P53798 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Fdft1P53798 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Fdft1P53798 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.34□□□□□ -0.43
Fdft1P53798 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Fdft1P53798 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms