Protein–RNA interactions for Protein: P48985

Atoh1, Protein atonal homolog 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atoh1P48985 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Atoh1P48985 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Atoh1P48985 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atoh1P48985 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atoh1P48985 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atoh1P48985 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Atoh1P48985 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atoh1P48985 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atoh1P48985 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atoh1P48985 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atoh1P48985 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Atoh1P48985 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atoh1P48985 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.89□□□□□ -0.19
Atoh1P48985 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atoh1P48985 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atoh1P48985 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atoh1P48985 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Atoh1P48985 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Atoh1P48985 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Atoh1P48985 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.89□□□□□ -0.19
Atoh1P48985 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atoh1P48985 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Atoh1P48985 Gm23912-201ENSMUST00000104687 87 ntBASIC13.89□□□□□ -0.19
Atoh1P48985 Gm11660-201ENSMUST00000120955 412 ntBASIC13.89□□□□□ -0.19
Atoh1P48985 Gm11836-201ENSMUST00000121022 441 ntBASIC13.89□□□□□ -0.19
Atoh1P48985 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atoh1P48985 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atoh1P48985 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atoh1P48985 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atoh1P48985 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Atoh1P48985 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Atoh1P48985 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atoh1P48985 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Atoh1P48985 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Atoh1P48985 AC166344.1-201ENSMUST00000223745 674 ntBASIC13.89□□□□□ -0.19
Atoh1P48985 AC122350.1-201ENSMUST00000228135 533 ntBASIC13.89□□□□□ -0.19
Atoh1P48985 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atoh1P48985 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atoh1P48985 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atoh1P48985 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atoh1P48985 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.89□□□□□ -0.19
Atoh1P48985 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Atoh1P48985 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atoh1P48985 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
Atoh1P48985 Gm13910-201ENSMUST00000121752 1428 ntBASIC13.89□□□□□ -0.19
Atoh1P48985 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atoh1P48985 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atoh1P48985 Gm10152-201ENSMUST00000193475 1344 ntBASIC13.89□□□□□ -0.19
Atoh1P48985 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Atoh1P48985 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Atoh1P48985 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Atoh1P48985 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Atoh1P48985 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Atoh1P48985 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.88□□□□□ -0.19
Atoh1P48985 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Atoh1P48985 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Atoh1P48985 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Atoh1P48985 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Atoh1P48985 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Atoh1P48985 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Atoh1P48985 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Atoh1P48985 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Atoh1P48985 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Atoh1P48985 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Atoh1P48985 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Atoh1P48985 Gm11801-201ENSMUST00000117807 746 ntBASIC13.88□□□□□ -0.19
Atoh1P48985 Gm12816-201ENSMUST00000118069 1212 ntBASIC13.88□□□□□ -0.19
Atoh1P48985 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC13.88□□□□□ -0.19
Atoh1P48985 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Atoh1P48985 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Atoh1P48985 Ighv5-11-201ENSMUST00000193354 371 ntBASIC13.88□□□□□ -0.19
Atoh1P48985 Gm44711-201ENSMUST00000205414 1264 ntBASIC13.88□□□□□ -0.19
Atoh1P48985 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Atoh1P48985 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC13.88□□□□□ -0.19
Atoh1P48985 Gm19009-201ENSMUST00000223072 823 ntBASIC13.88□□□□□ -0.19
Atoh1P48985 AC165260.2-203ENSMUST00000224237 336 ntBASIC13.88□□□□□ -0.19
Atoh1P48985 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Atoh1P48985 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Atoh1P48985 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Atoh1P48985 Gm5879-201ENSMUST00000089501 1209 ntBASIC13.88□□□□□ -0.19
Atoh1P48985 Gm5537-201ENSMUST00000091117 1252 ntBASIC13.88□□□□□ -0.19
Atoh1P48985 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Atoh1P48985 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Atoh1P48985 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC13.88□□□□□ -0.19
Atoh1P48985 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Atoh1P48985 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Atoh1P48985 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Atoh1P48985 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Atoh1P48985 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.88□□□□□ -0.19
Atoh1P48985 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Atoh1P48985 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Atoh1P48985 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Atoh1P48985 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Atoh1P48985 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Atoh1P48985 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Atoh1P48985 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Atoh1P48985 AC154671.1-201ENSMUST00000228617 1578 ntBASIC13.88□□□□□ -0.19
Atoh1P48985 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Atoh1P48985 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Atoh1P48985 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms