Protein–RNA interactions for Protein: P48281

Vdr, Vitamin D3 receptor, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VdrP48281 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VdrP48281 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
VdrP48281 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
VdrP48281 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VdrP48281 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VdrP48281 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VdrP48281 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
VdrP48281 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VdrP48281 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VdrP48281 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.61□□□□□ -0.39
VdrP48281 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VdrP48281 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VdrP48281 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
VdrP48281 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
VdrP48281 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.61□□□□□ -0.39
VdrP48281 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VdrP48281 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VdrP48281 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
VdrP48281 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.61□□□□□ -0.39
VdrP48281 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
VdrP48281 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VdrP48281 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VdrP48281 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.61□□□□□ -0.39
VdrP48281 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.61□□□□□ -0.39
VdrP48281 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.61□□□□□ -0.39
VdrP48281 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.61□□□□□ -0.39
VdrP48281 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VdrP48281 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.61□□□□□ -0.39
VdrP48281 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.61□□□□□ -0.39
VdrP48281 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
VdrP48281 Gm9908-201ENSMUST00000211534 448 ntBASIC12.61□□□□□ -0.39
VdrP48281 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.61□□□□□ -0.39
VdrP48281 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
VdrP48281 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.61□□□□□ -0.39
VdrP48281 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VdrP48281 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VdrP48281 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
VdrP48281 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VdrP48281 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VdrP48281 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.61□□□□□ -0.39
VdrP48281 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VdrP48281 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VdrP48281 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.61□□□□□ -0.39
VdrP48281 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.61□□□□□ -0.39
VdrP48281 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VdrP48281 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VdrP48281 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.61□□□□□ -0.39
VdrP48281 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
VdrP48281 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VdrP48281 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VdrP48281 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VdrP48281 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
VdrP48281 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
VdrP48281 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VdrP48281 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.61□□□□□ -0.39
VdrP48281 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VdrP48281 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
VdrP48281 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.6□□□□□ -0.39
VdrP48281 Gm10686-201ENSMUST00000215389 3247 ntBASIC12.6□□□□□ -0.39
VdrP48281 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
VdrP48281 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VdrP48281 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VdrP48281 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VdrP48281 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VdrP48281 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VdrP48281 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VdrP48281 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VdrP48281 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
VdrP48281 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
VdrP48281 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
VdrP48281 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.6□□□□□ -0.39
VdrP48281 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.6□□□□□ -0.39
VdrP48281 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.6□□□□□ -0.39
VdrP48281 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.6□□□□□ -0.39
VdrP48281 Gm25025-201ENSMUST00000175018 111 ntBASIC12.6□□□□□ -0.39
VdrP48281 Gm23363-201ENSMUST00000175024 79 ntBASIC12.6□□□□□ -0.39
VdrP48281 Gm20641-201ENSMUST00000176069 615 ntTSL 3 BASIC12.6□□□□□ -0.39
VdrP48281 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.6□□□□□ -0.39
VdrP48281 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.6□□□□□ -0.39
VdrP48281 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.6□□□□□ -0.39
VdrP48281 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VdrP48281 Gm18624-201ENSMUST00000220966 658 ntBASIC12.6□□□□□ -0.39
VdrP48281 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.6□□□□□ -0.39
VdrP48281 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VdrP48281 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VdrP48281 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VdrP48281 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
VdrP48281 Gm25857-201ENSMUST00000082788 129 ntBASIC12.6□□□□□ -0.39
VdrP48281 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
VdrP48281 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.6□□□□□ -0.39
VdrP48281 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
VdrP48281 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
VdrP48281 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VdrP48281 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VdrP48281 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
VdrP48281 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VdrP48281 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VdrP48281 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VdrP48281 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VdrP48281 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms