Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gli1P47806 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.08□□□□□ -0.48
Gli1P47806 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Gli1P47806 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gli1P47806 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gli1P47806 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gli1P47806 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gli1P47806 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gli1P47806 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gli1P47806 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gli1P47806 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gli1P47806 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gli1P47806 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gli1P47806 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gli1P47806 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Gli1P47806 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Gli1P47806 Map1b-203ENSMUST00000223725 2669 ntBASIC12.07□□□□□ -0.48
Gli1P47806 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Gli1P47806 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gli1P47806 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.07□□□□□ -0.48
Gli1P47806 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gli1P47806 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gli1P47806 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gli1P47806 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gli1P47806 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gli1P47806 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gli1P47806 Gm12241-201ENSMUST00000118330 726 ntBASIC12.07□□□□□ -0.48
Gli1P47806 Gm12291-201ENSMUST00000121627 311 ntBASIC12.07□□□□□ -0.48
Gli1P47806 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Gli1P47806 Gm9630-201ENSMUST00000178304 885 ntBASIC12.07□□□□□ -0.48
Gli1P47806 Gm29199-201ENSMUST00000187766 775 ntBASIC12.07□□□□□ -0.48
Gli1P47806 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Gli1P47806 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.07□□□□□ -0.48
Gli1P47806 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.07□□□□□ -0.48
Gli1P47806 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.07□□□□□ -0.48
Gli1P47806 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.07□□□□□ -0.48
Gli1P47806 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.07□□□□□ -0.48
Gli1P47806 Gm6334-201ENSMUST00000207083 228 ntBASIC12.07□□□□□ -0.48
Gli1P47806 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.07□□□□□ -0.48
Gli1P47806 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.07□□□□□ -0.48
Gli1P47806 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Gli1P47806 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Gli1P47806 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gli1P47806 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gli1P47806 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gli1P47806 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gli1P47806 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Gli1P47806 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gli1P47806 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gli1P47806 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gli1P47806 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Gli1P47806 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gli1P47806 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gli1P47806 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gli1P47806 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gli1P47806 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Gli1P47806 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Gli1P47806 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gli1P47806 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gli1P47806 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gli1P47806 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.07□□□□□ -0.48
Gli1P47806 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Gli1P47806 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Gli1P47806 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.07□□□□□ -0.48
Gli1P47806 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gli1P47806 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gli1P47806 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Gli1P47806 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Gli1P47806 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gli1P47806 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gli1P47806 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gli1P47806 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Gli1P47806 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gli1P47806 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Gli1P47806 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Gli1P47806 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gli1P47806 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gli1P47806 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Gli1P47806 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Gli1P47806 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gli1P47806 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Gli1P47806 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gli1P47806 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Gli1P47806 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Gli1P47806 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.06□□□□□ -0.48
Gli1P47806 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gli1P47806 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gli1P47806 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.06□□□□□ -0.48
Gli1P47806 Gm10608-202ENSMUST00000213924 676 ntBASIC12.06□□□□□ -0.48
Gli1P47806 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.06□□□□□ -0.48
Gli1P47806 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gli1P47806 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gli1P47806 Mir339-201ENSMUST00000083659 96 ntBASIC12.06□□□□□ -0.48
Gli1P47806 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gli1P47806 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gli1P47806 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Gli1P47806 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Gli1P47806 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gli1P47806 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gli1P47806 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms