Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl12P40224 Gm11470-201ENSMUST00000118868 1475 ntBASIC12.67□□□□□ -0.38
Cxcl12P40224 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Cxcl12P40224 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl12P40224 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Cxcl12P40224 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl12P40224 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl12P40224 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.67□□□□□ -0.38
Cxcl12P40224 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl12P40224 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cxcl12P40224 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Cxcl12P40224 Gm8731-201ENSMUST00000118088 412 ntBASIC12.67□□□□□ -0.38
Cxcl12P40224 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.67□□□□□ -0.38
Cxcl12P40224 Gm13022-201ENSMUST00000121181 285 ntBASIC12.67□□□□□ -0.38
Cxcl12P40224 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Cxcl12P40224 Gm18711-201ENSMUST00000199341 750 ntBASIC12.67□□□□□ -0.38
Cxcl12P40224 Gm44158-201ENSMUST00000203881 505 ntBASIC12.67□□□□□ -0.38
Cxcl12P40224 Gm18463-201ENSMUST00000207258 474 ntBASIC12.67□□□□□ -0.38
Cxcl12P40224 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC12.67□□□□□ -0.38
Cxcl12P40224 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.67□□□□□ -0.38
Cxcl12P40224 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.67□□□□□ -0.38
Cxcl12P40224 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl12P40224 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl12P40224 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.67□□□□□ -0.38
Cxcl12P40224 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl12P40224 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl12P40224 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl12P40224 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.67□□□□□ -0.38
Cxcl12P40224 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl12P40224 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl12P40224 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl12P40224 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Cxcl12P40224 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl12P40224 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl12P40224 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl12P40224 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Cxcl12P40224 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl12P40224 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Cxcl12P40224 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl12P40224 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl12P40224 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl12P40224 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl12P40224 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl12P40224 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl12P40224 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl12P40224 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl12P40224 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl12P40224 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Cxcl12P40224 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl12P40224 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl12P40224 Gm11660-201ENSMUST00000120955 412 ntBASIC12.66□□□□□ -0.38
Cxcl12P40224 Gm5257-201ENSMUST00000121823 790 ntBASIC12.66□□□□□ -0.38
Cxcl12P40224 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Cxcl12P40224 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl12P40224 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Cxcl12P40224 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Cxcl12P40224 Gm29410-201ENSMUST00000188383 694 ntBASIC12.66□□□□□ -0.38
Cxcl12P40224 Gm5100-201ENSMUST00000195631 589 ntBASIC12.66□□□□□ -0.38
Cxcl12P40224 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl12P40224 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC12.66□□□□□ -0.38
Cxcl12P40224 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl12P40224 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl12P40224 Gm3619-201ENSMUST00000219947 775 ntBASIC12.66□□□□□ -0.38
Cxcl12P40224 AC102368.1-201ENSMUST00000227161 892 ntBASIC12.66□□□□□ -0.38
Cxcl12P40224 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Cxcl12P40224 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.66□□□□□ -0.38
Cxcl12P40224 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl12P40224 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl12P40224 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl12P40224 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl12P40224 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl12P40224 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl12P40224 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Cxcl12P40224 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl12P40224 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl12P40224 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl12P40224 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl12P40224 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl12P40224 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl12P40224 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl12P40224 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl12P40224 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl12P40224 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl12P40224 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl12P40224 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.65□□□□□ -0.38
Cxcl12P40224 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Cxcl12P40224 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl12P40224 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl12P40224 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl12P40224 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl12P40224 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC12.65□□□□□ -0.38
Cxcl12P40224 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Cxcl12P40224 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl12P40224 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC12.65□□□□□ -0.38
Cxcl12P40224 Gm18059-201ENSMUST00000208073 580 ntBASIC12.65□□□□□ -0.38
Cxcl12P40224 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl12P40224 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl12P40224 Gm6722-201ENSMUST00000221586 390 ntBASIC12.65□□□□□ -0.38
Cxcl12P40224 Ap3s1-202ENSMUST00000224622 978 ntBASIC12.65□□□□□ -0.38
Cxcl12P40224 AC136376.2-201ENSMUST00000228819 490 ntBASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms