Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Rfc1P35601 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rfc1P35601 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rfc1P35601 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rfc1P35601 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.03□□□□□ -0.32
Rfc1P35601 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rfc1P35601 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rfc1P35601 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rfc1P35601 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rfc1P35601 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rfc1P35601 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rfc1P35601 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rfc1P35601 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Rfc1P35601 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Rfc1P35601 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rfc1P35601 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Rfc1P35601 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.32
Rfc1P35601 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rfc1P35601 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rfc1P35601 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rfc1P35601 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC13.02□□□□□ -0.32
Rfc1P35601 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rfc1P35601 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rfc1P35601 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rfc1P35601 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rfc1P35601 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Rfc1P35601 Gm2238-201ENSMUST00000192074 3669 ntBASIC13.02□□□□□ -0.33
Rfc1P35601 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rfc1P35601 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rfc1P35601 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rfc1P35601 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rfc1P35601 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rfc1P35601 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.02□□□□□ -0.33
Rfc1P35601 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.02□□□□□ -0.33
Rfc1P35601 Gm13689-201ENSMUST00000119360 685 ntBASIC13.02□□□□□ -0.33
Rfc1P35601 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rfc1P35601 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.02□□□□□ -0.33
Rfc1P35601 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rfc1P35601 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.02□□□□□ -0.33
Rfc1P35601 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rfc1P35601 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.02□□□□□ -0.33
Rfc1P35601 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.02□□□□□ -0.33
Rfc1P35601 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rfc1P35601 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.02□□□□□ -0.33
Rfc1P35601 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.02□□□□□ -0.33
Rfc1P35601 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.02□□□□□ -0.33
Rfc1P35601 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.02□□□□□ -0.33
Rfc1P35601 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rfc1P35601 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rfc1P35601 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.02□□□□□ -0.33
Rfc1P35601 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rfc1P35601 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Rfc1P35601 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rfc1P35601 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rfc1P35601 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rfc1P35601 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rfc1P35601 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rfc1P35601 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rfc1P35601 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC13.02□□□□□ -0.33
Rfc1P35601 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rfc1P35601 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC13.02□□□□□ -0.33
Rfc1P35601 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC13.01□□□□□ -0.33
Rfc1P35601 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfc1P35601 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC13.01□□□□□ -0.33
Rfc1P35601 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rfc1P35601 Gm5124-202ENSMUST00000132683 2083 ntBASIC13.01□□□□□ -0.33
Rfc1P35601 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Rfc1P35601 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Rfc1P35601 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfc1P35601 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rfc1P35601 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfc1P35601 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfc1P35601 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Rfc1P35601 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfc1P35601 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfc1P35601 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfc1P35601 Gm7488-201ENSMUST00000117148 684 ntBASIC13.01□□□□□ -0.33
Rfc1P35601 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.01□□□□□ -0.33
Rfc1P35601 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.01□□□□□ -0.33
Rfc1P35601 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.01□□□□□ -0.33
Rfc1P35601 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.01□□□□□ -0.33
Rfc1P35601 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.01□□□□□ -0.33
Rfc1P35601 Gm38223-201ENSMUST00000194484 695 ntBASIC13.01□□□□□ -0.33
Rfc1P35601 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.01□□□□□ -0.33
Rfc1P35601 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.01□□□□□ -0.33
Rfc1P35601 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfc1P35601 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.01□□□□□ -0.33
Rfc1P35601 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfc1P35601 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rfc1P35601 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rfc1P35601 Gm7642-201ENSMUST00000216345 1809 ntBASIC13.01□□□□□ -0.33
Rfc1P35601 Gm43522-201ENSMUST00000196697 1922 ntBASIC13.01□□□□□ -0.33
Rfc1P35601 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rfc1P35601 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Rfc1P35601 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC13.01□□□□□ -0.33
Rfc1P35601 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfc1P35601 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Rfc1P35601 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
Rfc1P35601 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfc1P35601 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms