Protein–RNA interactions for Protein: P35278

Rab5c, Ras-related protein Rab-5C, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab5cP35278 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rab5cP35278 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rab5cP35278 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Rab5cP35278 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rab5cP35278 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rab5cP35278 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
Rab5cP35278 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC10.04□□□□□ -0.8
Rab5cP35278 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rab5cP35278 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Rab5cP35278 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rab5cP35278 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rab5cP35278 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rab5cP35278 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rab5cP35278 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Rab5cP35278 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rab5cP35278 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rab5cP35278 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rab5cP35278 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rab5cP35278 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Rab5cP35278 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Rab5cP35278 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Rab5cP35278 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC10.04□□□□□ -0.8
Rab5cP35278 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Rab5cP35278 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Rab5cP35278 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC10.04□□□□□ -0.8
Rab5cP35278 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Rab5cP35278 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC10.04□□□□□ -0.8
Rab5cP35278 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rab5cP35278 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Rab5cP35278 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC10.04□□□□□ -0.8
Rab5cP35278 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rab5cP35278 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Rab5cP35278 Gm45828-201ENSMUST00000206938 1836 ntBASIC10.04□□□□□ -0.8
Rab5cP35278 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Rab5cP35278 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Rab5cP35278 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rab5cP35278 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Rab5cP35278 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Rab5cP35278 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rab5cP35278 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Rab5cP35278 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Rab5cP35278 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rab5cP35278 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rab5cP35278 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Rab5cP35278 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rab5cP35278 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rab5cP35278 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Rab5cP35278 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rab5cP35278 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rab5cP35278 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rab5cP35278 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
Rab5cP35278 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Rab5cP35278 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Rab5cP35278 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Rab5cP35278 Gm43963-201ENSMUST00000203466 2488 ntBASIC10.04□□□□□ -0.8
Rab5cP35278 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC10.03□□□□□ -0.8
Rab5cP35278 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rab5cP35278 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rab5cP35278 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rab5cP35278 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.03□□□□□ -0.8
Rab5cP35278 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rab5cP35278 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Rab5cP35278 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Rab5cP35278 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rab5cP35278 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Rab5cP35278 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rab5cP35278 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Rab5cP35278 AC160405.1-201ENSMUST00000218207 1545 ntBASIC10.03□□□□□ -0.8
Rab5cP35278 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Rab5cP35278 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rab5cP35278 Gm37333-201ENSMUST00000192904 2251 ntBASIC10.03□□□□□ -0.8
Rab5cP35278 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rab5cP35278 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rab5cP35278 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rab5cP35278 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC10.03□□□□□ -0.8
Rab5cP35278 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rab5cP35278 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC10.03□□□□□ -0.8
Rab5cP35278 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC10.03□□□□□ -0.8
Rab5cP35278 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC10.03□□□□□ -0.8
Rab5cP35278 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC10.03□□□□□ -0.8
Rab5cP35278 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rab5cP35278 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Rab5cP35278 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC10.03□□□□□ -0.8
Rab5cP35278 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Rab5cP35278 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC10.03□□□□□ -0.8
Rab5cP35278 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
Rab5cP35278 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC10.03□□□□□ -0.8
Rab5cP35278 Gm46209-201ENSMUST00000217912 553 ntBASIC10.03□□□□□ -0.8
Rab5cP35278 Retreg1-206ENSMUST00000228306 1430 ntBASIC10.03□□□□□ -0.8
Rab5cP35278 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rab5cP35278 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rab5cP35278 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC10.03□□□□□ -0.8
Rab5cP35278 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rab5cP35278 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rab5cP35278 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rab5cP35278 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Rab5cP35278 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rab5cP35278 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rab5cP35278 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rab5cP35278 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms