Protein–RNA interactions for Protein: P28867

Prkcd, Protein kinase C delta type, mousemouse

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkcdP28867 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
PrkcdP28867 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PrkcdP28867 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.23□□□□□ -0.45
PrkcdP28867 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
PrkcdP28867 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.23□□□□□ -0.45
PrkcdP28867 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
PrkcdP28867 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PrkcdP28867 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
PrkcdP28867 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.23□□□□□ -0.45
PrkcdP28867 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PrkcdP28867 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PrkcdP28867 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PrkcdP28867 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PrkcdP28867 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
PrkcdP28867 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PrkcdP28867 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
PrkcdP28867 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
PrkcdP28867 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PrkcdP28867 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.22□□□□□ -0.45
PrkcdP28867 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
PrkcdP28867 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PrkcdP28867 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PrkcdP28867 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PrkcdP28867 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
PrkcdP28867 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.22□□□□□ -0.45
PrkcdP28867 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.22□□□□□ -0.45
PrkcdP28867 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PrkcdP28867 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PrkcdP28867 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PrkcdP28867 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.22□□□□□ -0.45
PrkcdP28867 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PrkcdP28867 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PrkcdP28867 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.22□□□□□ -0.45
PrkcdP28867 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PrkcdP28867 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PrkcdP28867 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PrkcdP28867 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
PrkcdP28867 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.22□□□□□ -0.45
PrkcdP28867 Gm6007-201ENSMUST00000208170 823 ntBASIC12.22□□□□□ -0.45
PrkcdP28867 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.22□□□□□ -0.45
PrkcdP28867 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.22□□□□□ -0.45
PrkcdP28867 Gm2423-201ENSMUST00000074863 733 ntBASIC12.22□□□□□ -0.45
PrkcdP28867 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
PrkcdP28867 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
PrkcdP28867 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.22□□□□□ -0.45
PrkcdP28867 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.22□□□□□ -0.45
PrkcdP28867 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PrkcdP28867 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PrkcdP28867 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PrkcdP28867 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PrkcdP28867 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PrkcdP28867 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PrkcdP28867 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PrkcdP28867 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PrkcdP28867 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.22□□□□□ -0.45
PrkcdP28867 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.22□□□□□ -0.45
PrkcdP28867 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PrkcdP28867 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
PrkcdP28867 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.21□□□□□ -0.45
PrkcdP28867 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
PrkcdP28867 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PrkcdP28867 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PrkcdP28867 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.21□□□□□ -0.45
PrkcdP28867 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PrkcdP28867 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PrkcdP28867 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PrkcdP28867 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PrkcdP28867 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PrkcdP28867 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PrkcdP28867 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.21□□□□□ -0.45
PrkcdP28867 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PrkcdP28867 Gm9083-201ENSMUST00000120423 819 ntBASIC12.21□□□□□ -0.45
PrkcdP28867 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.21□□□□□ -0.45
PrkcdP28867 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PrkcdP28867 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PrkcdP28867 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PrkcdP28867 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
PrkcdP28867 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PrkcdP28867 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PrkcdP28867 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.21□□□□□ -0.45
PrkcdP28867 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.21□□□□□ -0.45
PrkcdP28867 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.21□□□□□ -0.45
PrkcdP28867 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.21□□□□□ -0.45
PrkcdP28867 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PrkcdP28867 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
PrkcdP28867 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PrkcdP28867 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.21□□□□□ -0.45
PrkcdP28867 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
PrkcdP28867 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
PrkcdP28867 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.21□□□□□ -0.46
PrkcdP28867 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
PrkcdP28867 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
PrkcdP28867 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
PrkcdP28867 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
PrkcdP28867 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PrkcdP28867 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.2□□□□□ -0.46
PrkcdP28867 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PrkcdP28867 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.2□□□□□ -0.46
PrkcdP28867 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PrkcdP28867 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms