Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.72□□□□□ -0.37
Nfkb1P25799 Gm24749-201ENSMUST00000157838 343 ntBASIC12.72□□□□□ -0.37
Nfkb1P25799 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Nfkb1P25799 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nfkb1P25799 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nfkb1P25799 Gm17812-201ENSMUST00000204935 318 ntBASIC12.72□□□□□ -0.37
Nfkb1P25799 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.72□□□□□ -0.37
Nfkb1P25799 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.72□□□□□ -0.37
Nfkb1P25799 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Nfkb1P25799 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.72□□□□□ -0.37
Nfkb1P25799 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Nfkb1P25799 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nfkb1P25799 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nfkb1P25799 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nfkb1P25799 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nfkb1P25799 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nfkb1P25799 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Nfkb1P25799 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Nfkb1P25799 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Nfkb1P25799 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nfkb1P25799 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nfkb1P25799 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nfkb1P25799 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.72□□□□□ -0.37
Nfkb1P25799 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nfkb1P25799 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nfkb1P25799 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nfkb1P25799 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nfkb1P25799 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nfkb1P25799 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nfkb1P25799 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.71□□□□□ -0.37
Nfkb1P25799 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nfkb1P25799 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nfkb1P25799 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.71□□□□□ -0.37
Nfkb1P25799 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nfkb1P25799 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nfkb1P25799 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nfkb1P25799 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nfkb1P25799 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Nfkb1P25799 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.71□□□□□ -0.37
Nfkb1P25799 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nfkb1P25799 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.71□□□□□ -0.37
Nfkb1P25799 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.71□□□□□ -0.37
Nfkb1P25799 Gm7003-201ENSMUST00000195089 312 ntBASIC12.71□□□□□ -0.37
Nfkb1P25799 Gm43138-201ENSMUST00000199123 708 ntBASIC12.71□□□□□ -0.37
Nfkb1P25799 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.71□□□□□ -0.37
Nfkb1P25799 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.71□□□□□ -0.37
Nfkb1P25799 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.71□□□□□ -0.37
Nfkb1P25799 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nfkb1P25799 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Nfkb1P25799 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nfkb1P25799 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.71□□□□□ -0.37
Nfkb1P25799 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nfkb1P25799 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nfkb1P25799 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.71□□□□□ -0.37
Nfkb1P25799 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Nfkb1P25799 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nfkb1P25799 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Nfkb1P25799 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nfkb1P25799 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nfkb1P25799 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nfkb1P25799 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.71□□□□□ -0.38
Nfkb1P25799 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nfkb1P25799 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.71□□□□□ -0.38
Nfkb1P25799 Gm43289-201ENSMUST00000200537 1475 ntBASIC12.71□□□□□ -0.38
Nfkb1P25799 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nfkb1P25799 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nfkb1P25799 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nfkb1P25799 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nfkb1P25799 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.71□□□□□ -0.38
Nfkb1P25799 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Nfkb1P25799 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.7□□□□□ -0.38
Nfkb1P25799 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.7□□□□□ -0.38
Nfkb1P25799 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nfkb1P25799 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nfkb1P25799 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nfkb1P25799 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nfkb1P25799 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Nfkb1P25799 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nfkb1P25799 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.7□□□□□ -0.38
Nfkb1P25799 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.7□□□□□ -0.38
Nfkb1P25799 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nfkb1P25799 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nfkb1P25799 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Nfkb1P25799 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.7□□□□□ -0.38
Nfkb1P25799 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.7□□□□□ -0.38
Nfkb1P25799 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.7□□□□□ -0.38
Nfkb1P25799 Gm9083-201ENSMUST00000120423 819 ntBASIC12.7□□□□□ -0.38
Nfkb1P25799 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nfkb1P25799 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nfkb1P25799 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nfkb1P25799 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nfkb1P25799 Mir5120-201ENSMUST00000175020 78 ntBASIC12.7□□□□□ -0.38
Nfkb1P25799 Gm9230-201ENSMUST00000188228 532 ntBASIC12.7□□□□□ -0.38
Nfkb1P25799 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nfkb1P25799 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.7□□□□□ -0.38
Nfkb1P25799 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.7□□□□□ -0.38
Nfkb1P25799 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.7□□□□□ -0.38
Nfkb1P25799 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC12.7□□□□□ -0.38
Nfkb1P25799 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC12.7□□□□□ -0.38
Nfkb1P25799 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms