Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cntn1P12960 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cntn1P12960 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cntn1P12960 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cntn1P12960 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cntn1P12960 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cntn1P12960 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cntn1P12960 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cntn1P12960 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.86□□□□□ -0.51
Cntn1P12960 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cntn1P12960 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Cntn1P12960 Gm14130-201ENSMUST00000118417 987 ntBASIC11.86□□□□□ -0.51
Cntn1P12960 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.86□□□□□ -0.51
Cntn1P12960 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.86□□□□□ -0.51
Cntn1P12960 Gm26361-201ENSMUST00000158868 186 ntBASIC11.86□□□□□ -0.51
Cntn1P12960 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cntn1P12960 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.86□□□□□ -0.51
Cntn1P12960 Gm5070-201ENSMUST00000177599 862 ntBASIC11.86□□□□□ -0.51
Cntn1P12960 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.86□□□□□ -0.51
Cntn1P12960 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cntn1P12960 Gm44262-201ENSMUST00000204969 372 ntBASIC11.86□□□□□ -0.51
Cntn1P12960 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.86□□□□□ -0.51
Cntn1P12960 Gm45186-201ENSMUST00000206874 478 ntBASIC11.86□□□□□ -0.51
Cntn1P12960 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.86□□□□□ -0.51
Cntn1P12960 Gm45224-201ENSMUST00000208203 414 ntBASIC11.86□□□□□ -0.51
Cntn1P12960 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Cntn1P12960 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.86□□□□□ -0.51
Cntn1P12960 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cntn1P12960 Gm26035-201ENSMUST00000083065 308 ntBASIC11.86□□□□□ -0.51
Cntn1P12960 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cntn1P12960 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cntn1P12960 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cntn1P12960 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cntn1P12960 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.86□□□□□ -0.51
Cntn1P12960 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cntn1P12960 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cntn1P12960 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
Cntn1P12960 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Cntn1P12960 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cntn1P12960 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cntn1P12960 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.86□□□□□ -0.51
Cntn1P12960 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cntn1P12960 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.86□□□□□ -0.51
Cntn1P12960 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.86□□□□□ -0.51
Cntn1P12960 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cntn1P12960 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cntn1P12960 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cntn1P12960 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cntn1P12960 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cntn1P12960 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cntn1P12960 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cntn1P12960 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cntn1P12960 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cntn1P12960 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Cntn1P12960 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cntn1P12960 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cntn1P12960 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cntn1P12960 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Cntn1P12960 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cntn1P12960 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Cntn1P12960 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cntn1P12960 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cntn1P12960 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cntn1P12960 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cntn1P12960 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.85□□□□□ -0.51
Cntn1P12960 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cntn1P12960 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Cntn1P12960 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Cntn1P12960 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cntn1P12960 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.85□□□□□ -0.51
Cntn1P12960 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cntn1P12960 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.85□□□□□ -0.51
Cntn1P12960 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cntn1P12960 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cntn1P12960 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cntn1P12960 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cntn1P12960 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cntn1P12960 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Cntn1P12960 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cntn1P12960 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cntn1P12960 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Cntn1P12960 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cntn1P12960 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cntn1P12960 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.85□□□□□ -0.51
Cntn1P12960 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cntn1P12960 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cntn1P12960 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.85□□□□□ -0.51
Cntn1P12960 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.85□□□□□ -0.51
Cntn1P12960 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cntn1P12960 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cntn1P12960 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cntn1P12960 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cntn1P12960 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cntn1P12960 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cntn1P12960 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.84□□□□□ -0.51
Cntn1P12960 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cntn1P12960 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cntn1P12960 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cntn1P12960 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cntn1P12960 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms