Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sod1P08228 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sod1P08228 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.55□□□□□ -0.56
Sod1P08228 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Sod1P08228 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.55□□□□□ -0.56
Sod1P08228 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sod1P08228 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sod1P08228 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sod1P08228 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sod1P08228 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.55□□□□□ -0.56
Sod1P08228 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.55□□□□□ -0.56
Sod1P08228 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.55□□□□□ -0.56
Sod1P08228 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sod1P08228 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.54□□□□□ -0.56
Sod1P08228 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sod1P08228 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sod1P08228 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sod1P08228 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sod1P08228 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sod1P08228 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sod1P08228 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sod1P08228 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sod1P08228 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.54□□□□□ -0.56
Sod1P08228 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sod1P08228 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Sod1P08228 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sod1P08228 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Sod1P08228 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Sod1P08228 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
Sod1P08228 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sod1P08228 Gm11956-201ENSMUST00000119525 512 ntBASIC11.54□□□□□ -0.56
Sod1P08228 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC11.54□□□□□ -0.56
Sod1P08228 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC11.54□□□□□ -0.56
Sod1P08228 Gm8815-201ENSMUST00000173809 620 ntBASIC11.54□□□□□ -0.56
Sod1P08228 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.54□□□□□ -0.56
Sod1P08228 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11.54□□□□□ -0.56
Sod1P08228 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sod1P08228 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sod1P08228 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.54□□□□□ -0.56
Sod1P08228 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sod1P08228 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Sod1P08228 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Sod1P08228 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sod1P08228 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sod1P08228 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sod1P08228 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sod1P08228 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sod1P08228 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sod1P08228 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.54□□□□□ -0.56
Sod1P08228 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Sod1P08228 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sod1P08228 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.54□□□□□ -0.56
Sod1P08228 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sod1P08228 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Sod1P08228 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sod1P08228 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sod1P08228 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sod1P08228 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sod1P08228 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sod1P08228 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sod1P08228 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sod1P08228 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sod1P08228 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sod1P08228 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sod1P08228 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Sod1P08228 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Sod1P08228 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sod1P08228 Gm12579-201ENSMUST00000118040 783 ntBASIC11.53□□□□□ -0.56
Sod1P08228 Gm14585-201ENSMUST00000120713 634 ntBASIC11.53□□□□□ -0.56
Sod1P08228 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC11.53□□□□□ -0.56
Sod1P08228 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.53□□□□□ -0.56
Sod1P08228 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sod1P08228 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sod1P08228 Gm4310-201ENSMUST00000177847 889 ntBASIC11.53□□□□□ -0.56
Sod1P08228 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.53□□□□□ -0.56
Sod1P08228 Gm4034-201ENSMUST00000187674 480 ntBASIC11.53□□□□□ -0.56
Sod1P08228 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC11.53□□□□□ -0.56
Sod1P08228 Gm19287-201ENSMUST00000203190 358 ntBASIC11.53□□□□□ -0.56
Sod1P08228 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.53□□□□□ -0.56
Sod1P08228 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sod1P08228 CT485607.1-201ENSMUST00000216100 85 ntBASIC11.53□□□□□ -0.56
Sod1P08228 AC153505.1-201ENSMUST00000218819 1071 ntBASIC11.53□□□□□ -0.56
Sod1P08228 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sod1P08228 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sod1P08228 Snora73b-201ENSMUST00000083419 205 ntBASIC11.53□□□□□ -0.56
Sod1P08228 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Sod1P08228 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sod1P08228 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Sod1P08228 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Sod1P08228 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.53□□□□□ -0.56
Sod1P08228 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sod1P08228 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Sod1P08228 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Sod1P08228 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sod1P08228 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sod1P08228 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sod1P08228 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sod1P08228 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sod1P08228 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.53□□□□□ -0.56
Sod1P08228 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms