Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC10.86□□□□□ -0.67
P04224 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04224 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
P04224 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04224 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
P04224 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04224 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04224 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
P04224 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04224 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04224 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04224 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04224 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04224 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04224 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04224 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04224 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
P04224 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
P04224 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC10.86□□□□□ -0.67
P04224 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
P04224 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04224 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04224 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04224 Gm44094-201ENSMUST00000204703 2030 ntBASIC10.85□□□□□ -0.67
P04224 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
P04224 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
P04224 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P04224 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P04224 Gm2128-201ENSMUST00000108009 2560 ntBASIC10.85□□□□□ -0.67
P04224 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P04224 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
P04224 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
P04224 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
P04224 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
P04224 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P04224 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.85□□□□□ -0.67
P04224 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
P04224 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P04224 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC10.85□□□□□ -0.67
P04224 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
P04224 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
P04224 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC10.85□□□□□ -0.67
P04224 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P04224 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P04224 Mir7684-201ENSMUST00000183858 60 ntBASIC10.85□□□□□ -0.67
P04224 Mir8102-201ENSMUST00000184148 139 ntBASIC10.85□□□□□ -0.67
P04224 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC10.85□□□□□ -0.67
P04224 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC10.85□□□□□ -0.67
P04224 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
P04224 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC10.85□□□□□ -0.67
P04224 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P04224 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P04224 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P04224 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
P04224 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
P04224 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P04224 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P04224 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
P04224 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC10.85□□□□□ -0.67
P04224 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
P04224 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
P04224 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P04224 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P04224 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
P04224 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P04224 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P04224 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P04224 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
P04224 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
P04224 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
P04224 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
P04224 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P04224 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
P04224 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P04224 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
P04224 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC10.84□□□□□ -0.67
P04224 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
P04224 Gm36987-201ENSMUST00000194704 2979 ntBASIC10.84□□□□□ -0.67
P04224 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P04224 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
P04224 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
P04224 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P04224 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
P04224 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
P04224 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
P04224 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
P04224 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P04224 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC10.84□□□□□ -0.67
P04224 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
P04224 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
P04224 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
P04224 Gm38223-201ENSMUST00000194484 695 ntBASIC10.84□□□□□ -0.67
P04224 AC122305.4-201ENSMUST00000216159 1206 ntBASIC10.84□□□□□ -0.67
P04224 AC192088.1-201ENSMUST00000227561 301 ntBASIC10.84□□□□□ -0.67
P04224 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P04224 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P04224 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
P04224 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P04224 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
P04224 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms