Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Igh-VJ558P01758 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Igh-VJ558P01758 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Igh-VJ558P01758 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Igh-VJ558P01758 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC10.66□□□□□ -0.7
Igh-VJ558P01758 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Igh-VJ558P01758 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igh-VJ558P01758 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igh-VJ558P01758 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC10.66□□□□□ -0.7
Igh-VJ558P01758 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igh-VJ558P01758 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC10.66□□□□□ -0.7
Igh-VJ558P01758 AC167669.2-201ENSMUST00000224417 1620 ntBASIC10.66□□□□□ -0.7
Igh-VJ558P01758 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Igh-VJ558P01758 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igh-VJ558P01758 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igh-VJ558P01758 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC10.66□□□□□ -0.7
Igh-VJ558P01758 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igh-VJ558P01758 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
Igh-VJ558P01758 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Igh-VJ558P01758 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igh-VJ558P01758 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igh-VJ558P01758 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Igh-VJ558P01758 Gm11531-201ENSMUST00000117614 555 ntBASIC10.66□□□□□ -0.7
Igh-VJ558P01758 Gm14832-201ENSMUST00000121289 322 ntBASIC10.66□□□□□ -0.7
Igh-VJ558P01758 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Igh-VJ558P01758 Gm8062-201ENSMUST00000139696 444 ntBASIC10.66□□□□□ -0.7
Igh-VJ558P01758 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Igh-VJ558P01758 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC10.66□□□□□ -0.7
Igh-VJ558P01758 Mir7085-201ENSMUST00000184353 66 ntBASIC10.66□□□□□ -0.7
Igh-VJ558P01758 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC10.66□□□□□ -0.7
Igh-VJ558P01758 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igh-VJ558P01758 Gm7046-201ENSMUST00000221351 977 ntBASIC10.66□□□□□ -0.7
Igh-VJ558P01758 Morn2-202ENSMUST00000227729 656 ntBASIC10.66□□□□□ -0.7
Igh-VJ558P01758 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Igh-VJ558P01758 Gm9823-201ENSMUST00000051212 327 ntBASIC10.66□□□□□ -0.7
Igh-VJ558P01758 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Igh-VJ558P01758 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Igh-VJ558P01758 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igh-VJ558P01758 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igh-VJ558P01758 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igh-VJ558P01758 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC10.66□□□□□ -0.7
Igh-VJ558P01758 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igh-VJ558P01758 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igh-VJ558P01758 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igh-VJ558P01758 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Igh-VJ558P01758 Gm7537-201ENSMUST00000221660 1414 ntBASIC10.66□□□□□ -0.7
Igh-VJ558P01758 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igh-VJ558P01758 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igh-VJ558P01758 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igh-VJ558P01758 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igh-VJ558P01758 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Igh-VJ558P01758 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Igh-VJ558P01758 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igh-VJ558P01758 Gm19692-201ENSMUST00000203856 2084 ntBASIC10.65□□□□□ -0.7
Igh-VJ558P01758 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igh-VJ558P01758 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC10.65□□□□□ -0.7
Igh-VJ558P01758 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Igh-VJ558P01758 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igh-VJ558P01758 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igh-VJ558P01758 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igh-VJ558P01758 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igh-VJ558P01758 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igh-VJ558P01758 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igh-VJ558P01758 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igh-VJ558P01758 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igh-VJ558P01758 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igh-VJ558P01758 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igh-VJ558P01758 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igh-VJ558P01758 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igh-VJ558P01758 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Igh-VJ558P01758 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igh-VJ558P01758 Gm25214-201ENSMUST00000104573 129 ntBASIC10.65□□□□□ -0.7
Igh-VJ558P01758 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Igh-VJ558P01758 Gm12957-201ENSMUST00000117835 377 ntBASIC10.65□□□□□ -0.7
Igh-VJ558P01758 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igh-VJ558P01758 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC10.65□□□□□ -0.7
Igh-VJ558P01758 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Igh-VJ558P01758 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC10.65□□□□□ -0.7
Igh-VJ558P01758 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC10.65□□□□□ -0.7
Igh-VJ558P01758 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
Igh-VJ558P01758 Gm8176-201ENSMUST00000191297 1099 ntBASIC10.65□□□□□ -0.7
Igh-VJ558P01758 Gm42693-201ENSMUST00000196779 631 ntBASIC10.65□□□□□ -0.7
Igh-VJ558P01758 Gm7619-201ENSMUST00000210649 1282 ntBASIC10.65□□□□□ -0.7
Igh-VJ558P01758 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC10.65□□□□□ -0.7
Igh-VJ558P01758 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igh-VJ558P01758 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igh-VJ558P01758 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC10.65□□□□□ -0.7
Igh-VJ558P01758 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Igh-VJ558P01758 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Igh-VJ558P01758 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Igh-VJ558P01758 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igh-VJ558P01758 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igh-VJ558P01758 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Igh-VJ558P01758 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Igh-VJ558P01758 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Igh-VJ558P01758 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igh-VJ558P01758 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
Igh-VJ558P01758 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Igh-VJ558P01758 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.65□□□□□ -0.71
Igh-VJ558P01758 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms