Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cops4O88544 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
Cops4O88544 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cops4O88544 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cops4O88544 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Cops4O88544 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cops4O88544 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cops4O88544 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.4□□□□□ -0.58
Cops4O88544 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cops4O88544 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cops4O88544 Gm5687-201ENSMUST00000118252 640 ntBASIC11.4□□□□□ -0.58
Cops4O88544 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.4□□□□□ -0.58
Cops4O88544 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cops4O88544 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC11.4□□□□□ -0.58
Cops4O88544 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC11.4□□□□□ -0.58
Cops4O88544 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Cops4O88544 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC11.4□□□□□ -0.58
Cops4O88544 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cops4O88544 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cops4O88544 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cops4O88544 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Cops4O88544 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Cops4O88544 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cops4O88544 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cops4O88544 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.4□□□□□ -0.58
Cops4O88544 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.4□□□□□ -0.58
Cops4O88544 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cops4O88544 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cops4O88544 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.4□□□□□ -0.59
Cops4O88544 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.4□□□□□ -0.59
Cops4O88544 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.4□□□□□ -0.59
Cops4O88544 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.59
Cops4O88544 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cops4O88544 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cops4O88544 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cops4O88544 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cops4O88544 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cops4O88544 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cops4O88544 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cops4O88544 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cops4O88544 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Cops4O88544 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cops4O88544 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cops4O88544 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cops4O88544 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cops4O88544 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cops4O88544 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cops4O88544 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC11.39□□□□□ -0.59
Cops4O88544 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC11.39□□□□□ -0.59
Cops4O88544 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11.39□□□□□ -0.59
Cops4O88544 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cops4O88544 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Cops4O88544 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cops4O88544 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cops4O88544 Gm44069-201ENSMUST00000204898 506 ntBASIC11.39□□□□□ -0.59
Cops4O88544 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Cops4O88544 Gm45668-201ENSMUST00000211271 493 ntBASIC11.39□□□□□ -0.59
Cops4O88544 Gm18473-201ENSMUST00000220543 868 ntBASIC11.39□□□□□ -0.59
Cops4O88544 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cops4O88544 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cops4O88544 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cops4O88544 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cops4O88544 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cops4O88544 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Cops4O88544 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cops4O88544 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Cops4O88544 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cops4O88544 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Cops4O88544 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cops4O88544 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC11.39□□□□□ -0.59
Cops4O88544 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cops4O88544 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cops4O88544 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cops4O88544 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cops4O88544 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Cops4O88544 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cops4O88544 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cops4O88544 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cops4O88544 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.39□□□□□ -0.59
Cops4O88544 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cops4O88544 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cops4O88544 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cops4O88544 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cops4O88544 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cops4O88544 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cops4O88544 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cops4O88544 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cops4O88544 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC11.38□□□□□ -0.59
Cops4O88544 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cops4O88544 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cops4O88544 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cops4O88544 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cops4O88544 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cops4O88544 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cops4O88544 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Cops4O88544 Gm12928-201ENSMUST00000117115 573 ntBASIC11.38□□□□□ -0.59
Cops4O88544 Gm14921-201ENSMUST00000118643 908 ntBASIC11.38□□□□□ -0.59
Cops4O88544 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cops4O88544 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.38□□□□□ -0.59
Cops4O88544 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms