Protein–RNA interactions for Protein: O55029

Copb2, Coatomer subunit beta', mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb2O55029 Gm37448-201ENSMUST00000192795 697 ntBASIC14.2□□□□□ -0.14
Copb2O55029 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Copb2O55029 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Copb2O55029 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Copb2O55029 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Copb2O55029 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Copb2O55029 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Copb2O55029 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Copb2O55029 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Copb2O55029 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.2□□□□□ -0.14
Copb2O55029 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Copb2O55029 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Copb2O55029 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Copb2O55029 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Copb2O55029 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Copb2O55029 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Copb2O55029 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Copb2O55029 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Copb2O55029 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.19□□□□□ -0.14
Copb2O55029 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Copb2O55029 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Copb2O55029 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Copb2O55029 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Copb2O55029 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Copb2O55029 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Copb2O55029 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC14.19□□□□□ -0.14
Copb2O55029 Gm11989-201ENSMUST00000117240 672 ntBASIC14.19□□□□□ -0.14
Copb2O55029 Gm11362-201ENSMUST00000118838 850 ntBASIC14.19□□□□□ -0.14
Copb2O55029 Gm12566-201ENSMUST00000121479 359 ntBASIC14.19□□□□□ -0.14
Copb2O55029 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Copb2O55029 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC14.19□□□□□ -0.14
Copb2O55029 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Copb2O55029 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC14.19□□□□□ -0.14
Copb2O55029 Abhd11os-203ENSMUST00000222613 363 ntBASIC14.19□□□□□ -0.14
Copb2O55029 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Copb2O55029 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Copb2O55029 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Copb2O55029 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Copb2O55029 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Copb2O55029 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Copb2O55029 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC14.19□□□□□ -0.14
Copb2O55029 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Copb2O55029 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Copb2O55029 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Copb2O55029 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Copb2O55029 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Copb2O55029 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Copb2O55029 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Copb2O55029 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Copb2O55029 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Copb2O55029 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Copb2O55029 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Copb2O55029 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Copb2O55029 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Copb2O55029 Gm44942-201ENSMUST00000096093 2072 ntBASIC14.18□□□□□ -0.14
Copb2O55029 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Copb2O55029 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Copb2O55029 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Copb2O55029 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Copb2O55029 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Copb2O55029 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC14.18□□□□□ -0.14
Copb2O55029 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC14.18□□□□□ -0.14
Copb2O55029 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Copb2O55029 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Copb2O55029 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Copb2O55029 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Copb2O55029 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Copb2O55029 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Copb2O55029 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.18□□□□□ -0.14
Copb2O55029 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC14.18□□□□□ -0.14
Copb2O55029 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Copb2O55029 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Copb2O55029 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Copb2O55029 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Copb2O55029 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Copb2O55029 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Copb2O55029 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Copb2O55029 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Copb2O55029 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Copb2O55029 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Copb2O55029 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Copb2O55029 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Copb2O55029 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Copb2O55029 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Copb2O55029 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.17□□□□□ -0.14
Copb2O55029 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Copb2O55029 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Copb2O55029 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Copb2O55029 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Copb2O55029 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Copb2O55029 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Copb2O55029 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Copb2O55029 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Copb2O55029 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Copb2O55029 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Copb2O55029 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Copb2O55029 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Copb2O55029 Gm15711-201ENSMUST00000118889 535 ntBASIC14.17□□□□□ -0.14
Copb2O55029 Gm12380-201ENSMUST00000119012 544 ntBASIC14.17□□□□□ -0.14
Copb2O55029 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms