Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf13O54965 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf13O54965 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf13O54965 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf13O54965 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf13O54965 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf13O54965 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf13O54965 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf13O54965 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf13O54965 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf13O54965 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf13O54965 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.19□□□□□ -0.62
Rnf13O54965 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf13O54965 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf13O54965 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf13O54965 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.19□□□□□ -0.62
Rnf13O54965 Auts2-212ENSMUST00000178555 309 ntBASIC11.19□□□□□ -0.62
Rnf13O54965 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Rnf13O54965 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf13O54965 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.19□□□□□ -0.62
Rnf13O54965 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.19□□□□□ -0.62
Rnf13O54965 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.19□□□□□ -0.62
Rnf13O54965 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.19□□□□□ -0.62
Rnf13O54965 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC11.19□□□□□ -0.62
Rnf13O54965 AC162801.1-201ENSMUST00000220612 198 ntBASIC11.19□□□□□ -0.62
Rnf13O54965 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf13O54965 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Rnf13O54965 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Rnf13O54965 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Rnf13O54965 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf13O54965 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
Rnf13O54965 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Rnf13O54965 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf13O54965 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf13O54965 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf13O54965 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.19□□□□□ -0.62
Rnf13O54965 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf13O54965 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf13O54965 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf13O54965 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Rnf13O54965 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Rnf13O54965 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf13O54965 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.19□□□□□ -0.62
Rnf13O54965 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf13O54965 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
Rnf13O54965 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf13O54965 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf13O54965 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf13O54965 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf13O54965 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf13O54965 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf13O54965 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf13O54965 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.18□□□□□ -0.62
Rnf13O54965 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Rnf13O54965 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf13O54965 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf13O54965 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf13O54965 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf13O54965 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Rnf13O54965 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf13O54965 Gm13369-201ENSMUST00000119442 987 ntBASIC11.18□□□□□ -0.62
Rnf13O54965 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf13O54965 Gm23984-201ENSMUST00000157139 203 ntBASIC11.18□□□□□ -0.62
Rnf13O54965 Rmrp-201ENSMUST00000157463 271 ntBASIC11.18□□□□□ -0.62
Rnf13O54965 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC11.18□□□□□ -0.62
Rnf13O54965 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.18□□□□□ -0.62
Rnf13O54965 Gm8810-201ENSMUST00000172895 754 ntBASIC11.18□□□□□ -0.62
Rnf13O54965 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf13O54965 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf13O54965 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf13O54965 Gm8515-201ENSMUST00000194852 576 ntBASIC11.18□□□□□ -0.62
Rnf13O54965 Gm37497-201ENSMUST00000195830 798 ntBASIC11.18□□□□□ -0.62
Rnf13O54965 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.18□□□□□ -0.62
Rnf13O54965 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf13O54965 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf13O54965 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf13O54965 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf13O54965 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf13O54965 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf13O54965 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.18□□□□□ -0.62
Rnf13O54965 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf13O54965 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf13O54965 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Rnf13O54965 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf13O54965 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Rnf13O54965 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf13O54965 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf13O54965 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf13O54965 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf13O54965 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf13O54965 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.17□□□□□ -0.62
Rnf13O54965 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf13O54965 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.17□□□□□ -0.62
Rnf13O54965 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf13O54965 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf13O54965 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf13O54965 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf13O54965 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf13O54965 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf13O54965 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms