Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Colca2F8VPY8 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Colca2F8VPY8 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Colca2F8VPY8 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Colca2F8VPY8 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.61□□□□□ -0.55
Colca2F8VPY8 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Colca2F8VPY8 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Colca2F8VPY8 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Colca2F8VPY8 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.61□□□□□ -0.55
Colca2F8VPY8 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Colca2F8VPY8 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Colca2F8VPY8 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Colca2F8VPY8 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Colca2F8VPY8 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Colca2F8VPY8 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Colca2F8VPY8 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Colca2F8VPY8 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Colca2F8VPY8 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Colca2F8VPY8 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Colca2F8VPY8 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Colca2F8VPY8 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.6□□□□□ -0.55
Colca2F8VPY8 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Colca2F8VPY8 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Colca2F8VPY8 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Colca2F8VPY8 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Colca2F8VPY8 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Colca2F8VPY8 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Colca2F8VPY8 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Colca2F8VPY8 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Colca2F8VPY8 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.6□□□□□ -0.55
Colca2F8VPY8 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Colca2F8VPY8 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Colca2F8VPY8 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Colca2F8VPY8 Gm25766-201ENSMUST00000104101 131 ntBASIC11.6□□□□□ -0.55
Colca2F8VPY8 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC11.6□□□□□ -0.55
Colca2F8VPY8 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Colca2F8VPY8 Gm11422-201ENSMUST00000118925 1103 ntBASIC11.6□□□□□ -0.55
Colca2F8VPY8 Gm25545-201ENSMUST00000122673 323 ntBASIC11.6□□□□□ -0.55
Colca2F8VPY8 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC11.6□□□□□ -0.55
Colca2F8VPY8 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC11.6□□□□□ -0.55
Colca2F8VPY8 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Colca2F8VPY8 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Colca2F8VPY8 Gm7902-201ENSMUST00000198842 947 ntBASIC11.6□□□□□ -0.55
Colca2F8VPY8 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC11.6□□□□□ -0.55
Colca2F8VPY8 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC11.6□□□□□ -0.55
Colca2F8VPY8 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Colca2F8VPY8 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Colca2F8VPY8 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Colca2F8VPY8 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Colca2F8VPY8 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Colca2F8VPY8 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.6□□□□□ -0.55
Colca2F8VPY8 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.6□□□□□ -0.55
Colca2F8VPY8 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC11.6□□□□□ -0.55
Colca2F8VPY8 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Colca2F8VPY8 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Colca2F8VPY8 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Colca2F8VPY8 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Colca2F8VPY8 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Colca2F8VPY8 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Colca2F8VPY8 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Colca2F8VPY8 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Colca2F8VPY8 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Colca2F8VPY8 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Colca2F8VPY8 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Colca2F8VPY8 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.59□□□□□ -0.55
Colca2F8VPY8 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Colca2F8VPY8 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Colca2F8VPY8 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Colca2F8VPY8 Gm12419-201ENSMUST00000116649 636 ntBASIC11.59□□□□□ -0.55
Colca2F8VPY8 Gm13549-201ENSMUST00000118339 796 ntBASIC11.59□□□□□ -0.55
Colca2F8VPY8 Gm13022-201ENSMUST00000121181 285 ntBASIC11.59□□□□□ -0.55
Colca2F8VPY8 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC11.59□□□□□ -0.55
Colca2F8VPY8 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC11.59□□□□□ -0.55
Colca2F8VPY8 Ighv2-1-201ENSMUST00000170946 353 ntBASIC11.59□□□□□ -0.55
Colca2F8VPY8 Gm17798-201ENSMUST00000182282 1035 ntBASIC11.59□□□□□ -0.55
Colca2F8VPY8 Mir6407-201ENSMUST00000184510 101 ntBASIC11.59□□□□□ -0.55
Colca2F8VPY8 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC11.59□□□□□ -0.55
Colca2F8VPY8 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Colca2F8VPY8 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC11.59□□□□□ -0.55
Colca2F8VPY8 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Colca2F8VPY8 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Colca2F8VPY8 Gm6722-201ENSMUST00000221586 390 ntBASIC11.59□□□□□ -0.55
Colca2F8VPY8 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Colca2F8VPY8 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC11.59□□□□□ -0.55
Colca2F8VPY8 Gm5451-201ENSMUST00000080545 579 ntBASIC11.59□□□□□ -0.55
Colca2F8VPY8 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Colca2F8VPY8 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC11.59□□□□□ -0.55
Colca2F8VPY8 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Colca2F8VPY8 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.59□□□□□ -0.55
Colca2F8VPY8 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Colca2F8VPY8 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Colca2F8VPY8 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Colca2F8VPY8 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Colca2F8VPY8 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Colca2F8VPY8 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Colca2F8VPY8 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Colca2F8VPY8 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Colca2F8VPY8 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Colca2F8VPY8 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Colca2F8VPY8 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms