Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC17.06■□□□□ 0.32
Hfm1D3Z4R1 Gm12218-201ENSMUST00000117666 399 ntBASIC17.06■□□□□ 0.32
Hfm1D3Z4R1 Gm11783-201ENSMUST00000119549 885 ntBASIC17.06■□□□□ 0.32
Hfm1D3Z4R1 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hfm1D3Z4R1 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC17.06■□□□□ 0.32
Hfm1D3Z4R1 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hfm1D3Z4R1 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC17.06■□□□□ 0.32
Hfm1D3Z4R1 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC17.06■□□□□ 0.32
Hfm1D3Z4R1 Gm7940-201ENSMUST00000218195 769 ntBASIC17.06■□□□□ 0.32
Hfm1D3Z4R1 Gm4604-201ENSMUST00000025040 390 ntBASIC17.06■□□□□ 0.32
Hfm1D3Z4R1 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hfm1D3Z4R1 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hfm1D3Z4R1 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Hfm1D3Z4R1 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hfm1D3Z4R1 Gm36970-201ENSMUST00000193688 1859 ntBASIC17.06■□□□□ 0.32
Hfm1D3Z4R1 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hfm1D3Z4R1 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hfm1D3Z4R1 Zfp125-201ENSMUST00000079237 2488 ntBASIC17.06■□□□□ 0.32
Hfm1D3Z4R1 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Hfm1D3Z4R1 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hfm1D3Z4R1 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hfm1D3Z4R1 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Hfm1D3Z4R1 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hfm1D3Z4R1 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Hfm1D3Z4R1 Gm10169-201ENSMUST00000121822 348 ntBASIC17.05■□□□□ 0.32
Hfm1D3Z4R1 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC17.05■□□□□ 0.32
Hfm1D3Z4R1 Gm8723-201ENSMUST00000166076 820 ntBASIC17.05■□□□□ 0.32
Hfm1D3Z4R1 Gm8701-201ENSMUST00000169259 874 ntBASIC17.05■□□□□ 0.32
Hfm1D3Z4R1 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Hfm1D3Z4R1 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hfm1D3Z4R1 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hfm1D3Z4R1 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hfm1D3Z4R1 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC17.05■□□□□ 0.32
Hfm1D3Z4R1 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Hfm1D3Z4R1 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hfm1D3Z4R1 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hfm1D3Z4R1 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Hfm1D3Z4R1 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC17.05■□□□□ 0.32
Hfm1D3Z4R1 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hfm1D3Z4R1 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Hfm1D3Z4R1 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hfm1D3Z4R1 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC17.05■□□□□ 0.32
Hfm1D3Z4R1 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hfm1D3Z4R1 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hfm1D3Z4R1 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hfm1D3Z4R1 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hfm1D3Z4R1 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Hfm1D3Z4R1 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hfm1D3Z4R1 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hfm1D3Z4R1 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC17.04■□□□□ 0.32
Hfm1D3Z4R1 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Hfm1D3Z4R1 Gm15036-201ENSMUST00000118880 400 ntBASIC17.04■□□□□ 0.32
Hfm1D3Z4R1 Gm15610-201ENSMUST00000120584 195 ntBASIC17.04■□□□□ 0.32
Hfm1D3Z4R1 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC17.04■□□□□ 0.32
Hfm1D3Z4R1 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC17.04■□□□□ 0.32
Hfm1D3Z4R1 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Hfm1D3Z4R1 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Hfm1D3Z4R1 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hfm1D3Z4R1 Gm43778-201ENSMUST00000199438 199 ntBASIC17.04■□□□□ 0.32
Hfm1D3Z4R1 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC17.04■□□□□ 0.32
Hfm1D3Z4R1 Gm8574-201ENSMUST00000203207 924 ntBASIC17.04■□□□□ 0.32
Hfm1D3Z4R1 Gm18204-201ENSMUST00000209835 793 ntBASIC17.04■□□□□ 0.32
Hfm1D3Z4R1 Gm45500-201ENSMUST00000211676 803 ntBASIC17.04■□□□□ 0.32
Hfm1D3Z4R1 AC122346.3-201ENSMUST00000223983 306 ntBASIC17.04■□□□□ 0.32
Hfm1D3Z4R1 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Hfm1D3Z4R1 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Hfm1D3Z4R1 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC17.04■□□□□ 0.32
Hfm1D3Z4R1 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Hfm1D3Z4R1 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hfm1D3Z4R1 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hfm1D3Z4R1 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC17.04■□□□□ 0.32
Hfm1D3Z4R1 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Hfm1D3Z4R1 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Hfm1D3Z4R1 Gm44260-201ENSMUST00000204946 2094 ntBASIC17.04■□□□□ 0.32
Hfm1D3Z4R1 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Hfm1D3Z4R1 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hfm1D3Z4R1 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hfm1D3Z4R1 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Hfm1D3Z4R1 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hfm1D3Z4R1 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hfm1D3Z4R1 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hfm1D3Z4R1 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hfm1D3Z4R1 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC17.04■□□□□ 0.32
Hfm1D3Z4R1 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hfm1D3Z4R1 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hfm1D3Z4R1 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hfm1D3Z4R1 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC17.04■□□□□ 0.32
Hfm1D3Z4R1 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hfm1D3Z4R1 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hfm1D3Z4R1 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hfm1D3Z4R1 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hfm1D3Z4R1 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Hfm1D3Z4R1 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hfm1D3Z4R1 Gm9135-201ENSMUST00000182963 990 ntBASIC17.04■□□□□ 0.32
Hfm1D3Z4R1 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC17.04■□□□□ 0.32
Hfm1D3Z4R1 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hfm1D3Z4R1 Mt1-202ENSMUST00000211807 1085 ntBASIC17.04■□□□□ 0.32
Hfm1D3Z4R1 Gm18968-201ENSMUST00000221319 862 ntBASIC17.04■□□□□ 0.32
Hfm1D3Z4R1 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hfm1D3Z4R1 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms