Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm3543D3Z235 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm3543D3Z235 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm3543D3Z235 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm3543D3Z235 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm3543D3Z235 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Gm3543D3Z235 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm3543D3Z235 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm3543D3Z235 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Gm3543D3Z235 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Gm3543D3Z235 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Gm3543D3Z235 Gm11964-201ENSMUST00000120982 444 ntBASIC11.23□□□□□ -0.61
Gm3543D3Z235 Gm26956-201ENSMUST00000182176 986 ntBASIC11.23□□□□□ -0.61
Gm3543D3Z235 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.23□□□□□ -0.61
Gm3543D3Z235 Gm6621-201ENSMUST00000193251 772 ntBASIC11.23□□□□□ -0.61
Gm3543D3Z235 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.23□□□□□ -0.61
Gm3543D3Z235 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.23□□□□□ -0.61
Gm3543D3Z235 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Gm3543D3Z235 Gm21769-201ENSMUST00000211922 111 ntBASIC11.23□□□□□ -0.61
Gm3543D3Z235 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Gm3543D3Z235 Mir339-201ENSMUST00000083659 96 ntBASIC11.23□□□□□ -0.61
Gm3543D3Z235 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm3543D3Z235 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm3543D3Z235 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm3543D3Z235 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm3543D3Z235 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.23□□□□□ -0.61
Gm3543D3Z235 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm3543D3Z235 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm3543D3Z235 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm3543D3Z235 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm3543D3Z235 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Gm3543D3Z235 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm3543D3Z235 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Gm3543D3Z235 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
Gm3543D3Z235 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Gm3543D3Z235 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Gm3543D3Z235 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm3543D3Z235 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm3543D3Z235 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.23□□□□□ -0.61
Gm3543D3Z235 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Gm3543D3Z235 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm3543D3Z235 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Gm3543D3Z235 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm3543D3Z235 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm3543D3Z235 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Gm3543D3Z235 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gm3543D3Z235 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Gm3543D3Z235 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.22□□□□□ -0.61
Gm3543D3Z235 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.22□□□□□ -0.61
Gm3543D3Z235 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gm3543D3Z235 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gm3543D3Z235 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.22□□□□□ -0.61
Gm3543D3Z235 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Gm3543D3Z235 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.22□□□□□ -0.61
Gm3543D3Z235 Gm13813-201ENSMUST00000120998 787 ntBASIC11.22□□□□□ -0.61
Gm3543D3Z235 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Gm3543D3Z235 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Gm3543D3Z235 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Gm3543D3Z235 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.22□□□□□ -0.61
Gm3543D3Z235 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Gm3543D3Z235 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Gm3543D3Z235 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Gm3543D3Z235 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gm3543D3Z235 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Gm3543D3Z235 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Gm3543D3Z235 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Gm3543D3Z235 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Gm3543D3Z235 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Gm3543D3Z235 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Gm3543D3Z235 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.22□□□□□ -0.61
Gm3543D3Z235 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Gm3543D3Z235 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.22□□□□□ -0.61
Gm3543D3Z235 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.22□□□□□ -0.61
Gm3543D3Z235 Gm9257-201ENSMUST00000221254 232 ntBASIC11.22□□□□□ -0.61
Gm3543D3Z235 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.22□□□□□ -0.61
Gm3543D3Z235 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gm3543D3Z235 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Gm3543D3Z235 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gm3543D3Z235 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Gm3543D3Z235 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Gm3543D3Z235 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gm3543D3Z235 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gm3543D3Z235 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gm3543D3Z235 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Gm3543D3Z235 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.21□□□□□ -0.61
Gm3543D3Z235 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Gm3543D3Z235 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Gm3543D3Z235 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Gm3543D3Z235 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Gm3543D3Z235 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Gm3543D3Z235 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Gm3543D3Z235 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Gm3543D3Z235 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.21□□□□□ -0.61
Gm3543D3Z235 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Gm3543D3Z235 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Gm3543D3Z235 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Gm3543D3Z235 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Gm3543D3Z235 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Gm3543D3Z235 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Gm3543D3Z235 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms