Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Crlf3Q9Z2L7 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.51□□□□□ -0.41
Crlf3Q9Z2L7 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Crlf3Q9Z2L7 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Crlf3Q9Z2L7 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Crlf3Q9Z2L7 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Crlf3Q9Z2L7 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Crlf3Q9Z2L7 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Crlf3Q9Z2L7 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Crlf3Q9Z2L7 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Crlf3Q9Z2L7 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.51□□□□□ -0.41
Crlf3Q9Z2L7 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Crlf3Q9Z2L7 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Crlf3Q9Z2L7 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Crlf3Q9Z2L7 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Crlf3Q9Z2L7 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Crlf3Q9Z2L7 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.51□□□□□ -0.41
Crlf3Q9Z2L7 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.51□□□□□ -0.41
Crlf3Q9Z2L7 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Crlf3Q9Z2L7 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Crlf3Q9Z2L7 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Crlf3Q9Z2L7 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Crlf3Q9Z2L7 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Crlf3Q9Z2L7 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Crlf3Q9Z2L7 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.51□□□□□ -0.41
Crlf3Q9Z2L7 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Crlf3Q9Z2L7 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Crlf3Q9Z2L7 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Crlf3Q9Z2L7 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Crlf3Q9Z2L7 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Crlf3Q9Z2L7 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Crlf3Q9Z2L7 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Crlf3Q9Z2L7 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Crlf3Q9Z2L7 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Crlf3Q9Z2L7 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.5□□□□□ -0.41
Crlf3Q9Z2L7 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.5□□□□□ -0.41
Crlf3Q9Z2L7 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Crlf3Q9Z2L7 Gm15429-201ENSMUST00000151268 798 ntBASIC12.5□□□□□ -0.41
Crlf3Q9Z2L7 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Crlf3Q9Z2L7 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.5□□□□□ -0.41
Crlf3Q9Z2L7 Gm17150-201ENSMUST00000165577 381 ntBASIC12.5□□□□□ -0.41
Crlf3Q9Z2L7 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.5□□□□□ -0.41
Crlf3Q9Z2L7 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Crlf3Q9Z2L7 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Crlf3Q9Z2L7 Gm27892-201ENSMUST00000185017 106 ntBASIC12.5□□□□□ -0.41
Crlf3Q9Z2L7 Gm2495-201ENSMUST00000191160 466 ntBASIC12.5□□□□□ -0.41
Crlf3Q9Z2L7 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Crlf3Q9Z2L7 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Crlf3Q9Z2L7 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Crlf3Q9Z2L7 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Crlf3Q9Z2L7 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Crlf3Q9Z2L7 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.5□□□□□ -0.41
Crlf3Q9Z2L7 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Crlf3Q9Z2L7 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Crlf3Q9Z2L7 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Crlf3Q9Z2L7 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Crlf3Q9Z2L7 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.5□□□□□ -0.41
Crlf3Q9Z2L7 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Crlf3Q9Z2L7 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Crlf3Q9Z2L7 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Crlf3Q9Z2L7 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Crlf3Q9Z2L7 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Crlf3Q9Z2L7 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Crlf3Q9Z2L7 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Crlf3Q9Z2L7 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Crlf3Q9Z2L7 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Crlf3Q9Z2L7 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Crlf3Q9Z2L7 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Crlf3Q9Z2L7 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Crlf3Q9Z2L7 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Crlf3Q9Z2L7 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Crlf3Q9Z2L7 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Crlf3Q9Z2L7 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Crlf3Q9Z2L7 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Crlf3Q9Z2L7 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Crlf3Q9Z2L7 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Crlf3Q9Z2L7 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Crlf3Q9Z2L7 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Crlf3Q9Z2L7 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Crlf3Q9Z2L7 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Crlf3Q9Z2L7 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Crlf3Q9Z2L7 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Crlf3Q9Z2L7 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Crlf3Q9Z2L7 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Crlf3Q9Z2L7 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Crlf3Q9Z2L7 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Crlf3Q9Z2L7 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Crlf3Q9Z2L7 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Crlf3Q9Z2L7 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Crlf3Q9Z2L7 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.49□□□□□ -0.41
Crlf3Q9Z2L7 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Crlf3Q9Z2L7 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.49□□□□□ -0.41
Crlf3Q9Z2L7 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Crlf3Q9Z2L7 Gm15824-201ENSMUST00000119516 955 ntBASIC12.49□□□□□ -0.41
Crlf3Q9Z2L7 Gm13829-201ENSMUST00000119600 138 ntBASIC12.49□□□□□ -0.41
Crlf3Q9Z2L7 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Crlf3Q9Z2L7 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Crlf3Q9Z2L7 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Crlf3Q9Z2L7 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.49□□□□□ -0.41
Crlf3Q9Z2L7 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms