Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC13.3□□□□□ -0.28
Cpsf3Q9QXK7 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cpsf3Q9QXK7 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cpsf3Q9QXK7 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cpsf3Q9QXK7 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.3□□□□□ -0.28
Cpsf3Q9QXK7 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Cpsf3Q9QXK7 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cpsf3Q9QXK7 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cpsf3Q9QXK7 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cpsf3Q9QXK7 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cpsf3Q9QXK7 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cpsf3Q9QXK7 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.29□□□□□ -0.28
Cpsf3Q9QXK7 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf3Q9QXK7 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf3Q9QXK7 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf3Q9QXK7 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf3Q9QXK7 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf3Q9QXK7 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf3Q9QXK7 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf3Q9QXK7 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC13.29□□□□□ -0.28
Cpsf3Q9QXK7 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf3Q9QXK7 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf3Q9QXK7 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Cpsf3Q9QXK7 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf3Q9QXK7 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf3Q9QXK7 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf3Q9QXK7 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf3Q9QXK7 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cpsf3Q9QXK7 Gm5869-201ENSMUST00000200248 1257 ntBASIC13.29□□□□□ -0.28
Cpsf3Q9QXK7 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf3Q9QXK7 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC13.29□□□□□ -0.28
Cpsf3Q9QXK7 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf3Q9QXK7 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Cpsf3Q9QXK7 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf3Q9QXK7 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Cpsf3Q9QXK7 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.29□□□□□ -0.28
Cpsf3Q9QXK7 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Cpsf3Q9QXK7 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf3Q9QXK7 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf3Q9QXK7 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf3Q9QXK7 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Cpsf3Q9QXK7 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf3Q9QXK7 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf3Q9QXK7 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf3Q9QXK7 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf3Q9QXK7 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf3Q9QXK7 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf3Q9QXK7 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf3Q9QXK7 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf3Q9QXK7 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Cpsf3Q9QXK7 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.28□□□□□ -0.28
Cpsf3Q9QXK7 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf3Q9QXK7 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf3Q9QXK7 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf3Q9QXK7 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf3Q9QXK7 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf3Q9QXK7 Gm13665-201ENSMUST00000120830 528 ntBASIC13.28□□□□□ -0.28
Cpsf3Q9QXK7 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf3Q9QXK7 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC13.28□□□□□ -0.28
Cpsf3Q9QXK7 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf3Q9QXK7 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Cpsf3Q9QXK7 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Cpsf3Q9QXK7 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC13.28□□□□□ -0.28
Cpsf3Q9QXK7 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf3Q9QXK7 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Cpsf3Q9QXK7 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf3Q9QXK7 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.28□□□□□ -0.28
Cpsf3Q9QXK7 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.28□□□□□ -0.28
Cpsf3Q9QXK7 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.28□□□□□ -0.28
Cpsf3Q9QXK7 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf3Q9QXK7 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf3Q9QXK7 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC13.28□□□□□ -0.28
Cpsf3Q9QXK7 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf3Q9QXK7 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf3Q9QXK7 AC123857.2-201ENSMUST00000225756 1582 ntBASIC13.28□□□□□ -0.28
Cpsf3Q9QXK7 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf3Q9QXK7 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf3Q9QXK7 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf3Q9QXK7 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf3Q9QXK7 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf3Q9QXK7 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf3Q9QXK7 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Cpsf3Q9QXK7 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cpsf3Q9QXK7 Gm45495-201ENSMUST00000200940 1700 ntBASIC13.27□□□□□ -0.28
Cpsf3Q9QXK7 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cpsf3Q9QXK7 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.27□□□□□ -0.28
Cpsf3Q9QXK7 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cpsf3Q9QXK7 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cpsf3Q9QXK7 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.27□□□□□ -0.28
Cpsf3Q9QXK7 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cpsf3Q9QXK7 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cpsf3Q9QXK7 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cpsf3Q9QXK7 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cpsf3Q9QXK7 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cpsf3Q9QXK7 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cpsf3Q9QXK7 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cpsf3Q9QXK7 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cpsf3Q9QXK7 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cpsf3Q9QXK7 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cpsf3Q9QXK7 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms