Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC11.06□□□□□ -0.64
Trem1Q9JKE2 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Gm25948-201ENSMUST00000175334 112 ntBASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Gm24420-201ENSMUST00000176676 59 ntBASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Mir7221-201ENSMUST00000184009 72 ntBASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Gm46209-201ENSMUST00000217912 553 ntBASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Zfp384-201ENSMUST00000046064 3108 ntTSL 5 BASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Gm11298-201ENSMUST00000120503 1799 ntBASIC11.05□□□□□ -0.64
Trem1Q9JKE2 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trem1Q9JKE2 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trem1Q9JKE2 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.05□□□□□ -0.64
Trem1Q9JKE2 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trem1Q9JKE2 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trem1Q9JKE2 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trem1Q9JKE2 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trem1Q9JKE2 Gm7598-201ENSMUST00000130251 3123 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trem1Q9JKE2 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trem1Q9JKE2 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trem1Q9JKE2 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trem1Q9JKE2 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trem1Q9JKE2 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
Trem1Q9JKE2 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trem1Q9JKE2 Zfp943-201ENSMUST00000055349 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trem1Q9JKE2 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Trem1Q9JKE2 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trem1Q9JKE2 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trem1Q9JKE2 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trem1Q9JKE2 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trem1Q9JKE2 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trem1Q9JKE2 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trem1Q9JKE2 Gm15393-201ENSMUST00000120499 219 ntBASIC11.05□□□□□ -0.64
Trem1Q9JKE2 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trem1Q9JKE2 Gm28630-201ENSMUST00000187806 498 ntBASIC11.05□□□□□ -0.64
Trem1Q9JKE2 Gm5264-201ENSMUST00000190584 848 ntBASIC11.05□□□□□ -0.64
Trem1Q9JKE2 Gm10766-202ENSMUST00000194123 606 ntBASIC11.05□□□□□ -0.64
Trem1Q9JKE2 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC11.05□□□□□ -0.64
Trem1Q9JKE2 Gm9229-201ENSMUST00000222777 126 ntBASIC11.05□□□□□ -0.64
Trem1Q9JKE2 AC126408.1-201ENSMUST00000225184 523 ntBASIC11.05□□□□□ -0.64
Trem1Q9JKE2 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trem1Q9JKE2 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trem1Q9JKE2 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trem1Q9JKE2 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Trem1Q9JKE2 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trem1Q9JKE2 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Trem1Q9JKE2 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trem1Q9JKE2 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trem1Q9JKE2 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trem1Q9JKE2 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC11.05□□□□□ -0.64
Trem1Q9JKE2 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Trem1Q9JKE2 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Trem1Q9JKE2 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trem1Q9JKE2 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Trem1Q9JKE2 CT009601.1-201ENSMUST00000225567 2705 ntBASIC11.05□□□□□ -0.64
Trem1Q9JKE2 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trem1Q9JKE2 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trem1Q9JKE2 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trem1Q9JKE2 AC131029.1-201ENSMUST00000226391 2929 ntBASIC11.05□□□□□ -0.64
Trem1Q9JKE2 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Trem1Q9JKE2 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Gm17980-201ENSMUST00000217977 2349 ntBASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trem1Q9JKE2 Ttc16-206ENSMUST00000161430 2874 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms