Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp4cQ9D7F7 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp4cQ9D7F7 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp4cQ9D7F7 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp4cQ9D7F7 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Chmp4cQ9D7F7 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Chmp4cQ9D7F7 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp4cQ9D7F7 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp4cQ9D7F7 Mup-ps23-201ENSMUST00000118063 630 ntBASIC14.79□□□□□ -0.04
Chmp4cQ9D7F7 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC14.79□□□□□ -0.04
Chmp4cQ9D7F7 Gm14760-201ENSMUST00000121831 999 ntBASIC14.79□□□□□ -0.04
Chmp4cQ9D7F7 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Chmp4cQ9D7F7 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp4cQ9D7F7 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Chmp4cQ9D7F7 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp4cQ9D7F7 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp4cQ9D7F7 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp4cQ9D7F7 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp4cQ9D7F7 Gm37827-201ENSMUST00000194486 1542 ntBASIC14.79□□□□□ -0.04
Chmp4cQ9D7F7 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Chmp4cQ9D7F7 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp4cQ9D7F7 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
Chmp4cQ9D7F7 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp4cQ9D7F7 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp4cQ9D7F7 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp4cQ9D7F7 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Chmp4cQ9D7F7 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp4cQ9D7F7 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Chmp4cQ9D7F7 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Chmp4cQ9D7F7 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Chmp4cQ9D7F7 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp4cQ9D7F7 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp4cQ9D7F7 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp4cQ9D7F7 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp4cQ9D7F7 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC14.78□□□□□ -0.04
Chmp4cQ9D7F7 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Chmp4cQ9D7F7 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp4cQ9D7F7 Daam2-202ENSMUST00000224595 1926 ntBASIC14.78□□□□□ -0.04
Chmp4cQ9D7F7 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp4cQ9D7F7 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp4cQ9D7F7 Gm37269-201ENSMUST00000193906 1891 ntBASIC14.78□□□□□ -0.04
Chmp4cQ9D7F7 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp4cQ9D7F7 Gm5053-201ENSMUST00000208361 1678 ntBASIC14.78□□□□□ -0.04
Chmp4cQ9D7F7 Gm10339-203ENSMUST00000225409 1671 ntBASIC14.78□□□□□ -0.04
Chmp4cQ9D7F7 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp4cQ9D7F7 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp4cQ9D7F7 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp4cQ9D7F7 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Chmp4cQ9D7F7 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp4cQ9D7F7 Gm12502-201ENSMUST00000120197 444 ntBASIC14.78□□□□□ -0.04
Chmp4cQ9D7F7 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC14.78□□□□□ -0.04
Chmp4cQ9D7F7 Gm29127-201ENSMUST00000188304 517 ntBASIC14.78□□□□□ -0.04
Chmp4cQ9D7F7 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC14.78□□□□□ -0.04
Chmp4cQ9D7F7 AC167013.1-201ENSMUST00000228592 202 ntBASIC14.78□□□□□ -0.04
Chmp4cQ9D7F7 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp4cQ9D7F7 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp4cQ9D7F7 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp4cQ9D7F7 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp4cQ9D7F7 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp4cQ9D7F7 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp4cQ9D7F7 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp4cQ9D7F7 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC14.78□□□□□ -0.04
Chmp4cQ9D7F7 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp4cQ9D7F7 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC14.78□□□□□ -0.04
Chmp4cQ9D7F7 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Chmp4cQ9D7F7 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp4cQ9D7F7 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Chmp4cQ9D7F7 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp4cQ9D7F7 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp4cQ9D7F7 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp4cQ9D7F7 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Chmp4cQ9D7F7 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC14.77□□□□□ -0.04
Chmp4cQ9D7F7 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Chmp4cQ9D7F7 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chmp4cQ9D7F7 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Chmp4cQ9D7F7 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Chmp4cQ9D7F7 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chmp4cQ9D7F7 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chmp4cQ9D7F7 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chmp4cQ9D7F7 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chmp4cQ9D7F7 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Chmp4cQ9D7F7 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Chmp4cQ9D7F7 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
Chmp4cQ9D7F7 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.77□□□□□ -0.05
Chmp4cQ9D7F7 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC14.77□□□□□ -0.05
Chmp4cQ9D7F7 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp4cQ9D7F7 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC14.77□□□□□ -0.05
Chmp4cQ9D7F7 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Chmp4cQ9D7F7 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC14.77□□□□□ -0.05
Chmp4cQ9D7F7 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC14.77□□□□□ -0.05
Chmp4cQ9D7F7 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp4cQ9D7F7 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Chmp4cQ9D7F7 Tyms-ps-201ENSMUST00000219550 915 ntBASIC14.77□□□□□ -0.05
Chmp4cQ9D7F7 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp4cQ9D7F7 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp4cQ9D7F7 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Chmp4cQ9D7F7 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp4cQ9D7F7 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Chmp4cQ9D7F7 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Chmp4cQ9D7F7 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms