Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3a3Q9D554 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.5□□□□□ -0.41
Sf3a3Q9D554 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3a3Q9D554 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.5□□□□□ -0.41
Sf3a3Q9D554 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.5□□□□□ -0.41
Sf3a3Q9D554 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC12.5□□□□□ -0.41
Sf3a3Q9D554 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3a3Q9D554 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Sf3a3Q9D554 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC12.5□□□□□ -0.41
Sf3a3Q9D554 Gm19078-201ENSMUST00000206311 727 ntBASIC12.5□□□□□ -0.41
Sf3a3Q9D554 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.5□□□□□ -0.41
Sf3a3Q9D554 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.5□□□□□ -0.41
Sf3a3Q9D554 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.5□□□□□ -0.41
Sf3a3Q9D554 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3a3Q9D554 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Sf3a3Q9D554 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3a3Q9D554 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3a3Q9D554 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.5□□□□□ -0.41
Sf3a3Q9D554 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3a3Q9D554 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Sf3a3Q9D554 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Sf3a3Q9D554 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.5□□□□□ -0.41
Sf3a3Q9D554 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Sf3a3Q9D554 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Sf3a3Q9D554 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3a3Q9D554 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3a3Q9D554 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3a3Q9D554 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.5□□□□□ -0.41
Sf3a3Q9D554 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Sf3a3Q9D554 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3a3Q9D554 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3a3Q9D554 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3a3Q9D554 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.5□□□□□ -0.41
Sf3a3Q9D554 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3a3Q9D554 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3a3Q9D554 AC153506.1-201ENSMUST00000218768 2915 ntBASIC12.5□□□□□ -0.41
Sf3a3Q9D554 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3a3Q9D554 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Sf3a3Q9D554 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3a3Q9D554 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Sf3a3Q9D554 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.49□□□□□ -0.41
Sf3a3Q9D554 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3a3Q9D554 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3a3Q9D554 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3a3Q9D554 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3a3Q9D554 Gm13135-201ENSMUST00000117628 3121 ntBASIC12.49□□□□□ -0.41
Sf3a3Q9D554 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3a3Q9D554 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Sf3a3Q9D554 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3a3Q9D554 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3a3Q9D554 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC12.49□□□□□ -0.41
Sf3a3Q9D554 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Sf3a3Q9D554 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3a3Q9D554 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3a3Q9D554 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3a3Q9D554 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Sf3a3Q9D554 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3a3Q9D554 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3a3Q9D554 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3a3Q9D554 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3a3Q9D554 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3a3Q9D554 Gm11594-201ENSMUST00000122313 162 ntBASIC12.49□□□□□ -0.41
Sf3a3Q9D554 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3a3Q9D554 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.49□□□□□ -0.41
Sf3a3Q9D554 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Sf3a3Q9D554 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3a3Q9D554 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.49□□□□□ -0.41
Sf3a3Q9D554 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3a3Q9D554 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.49□□□□□ -0.41
Sf3a3Q9D554 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.49□□□□□ -0.41
Sf3a3Q9D554 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3a3Q9D554 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3a3Q9D554 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3a3Q9D554 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3a3Q9D554 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3a3Q9D554 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3a3Q9D554 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3a3Q9D554 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3a3Q9D554 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3a3Q9D554 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3a3Q9D554 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3a3Q9D554 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3a3Q9D554 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3a3Q9D554 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sf3a3Q9D554 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sf3a3Q9D554 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Sf3a3Q9D554 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sf3a3Q9D554 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sf3a3Q9D554 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Sf3a3Q9D554 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sf3a3Q9D554 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sf3a3Q9D554 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sf3a3Q9D554 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sf3a3Q9D554 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sf3a3Q9D554 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sf3a3Q9D554 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sf3a3Q9D554 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.48□□□□□ -0.41
Sf3a3Q9D554 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sf3a3Q9D554 Gm11524-201ENSMUST00000119349 807 ntBASIC12.48□□□□□ -0.41
Sf3a3Q9D554 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms