Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim11Q99PQ2 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trim11Q99PQ2 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim11Q99PQ2 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trim11Q99PQ2 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim11Q99PQ2 Gm7104-201ENSMUST00000179741 2532 ntBASIC14.09□□□□□ -0.15
Trim11Q99PQ2 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trim11Q99PQ2 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim11Q99PQ2 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim11Q99PQ2 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim11Q99PQ2 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim11Q99PQ2 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim11Q99PQ2 Gm13342-201ENSMUST00000121055 207 ntBASIC14.09□□□□□ -0.15
Trim11Q99PQ2 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim11Q99PQ2 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.09□□□□□ -0.15
Trim11Q99PQ2 AC125209.1-201ENSMUST00000225812 766 ntBASIC14.09□□□□□ -0.15
Trim11Q99PQ2 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim11Q99PQ2 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim11Q99PQ2 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim11Q99PQ2 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC14.09□□□□□ -0.15
Trim11Q99PQ2 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim11Q99PQ2 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC14.09□□□□□ -0.15
Trim11Q99PQ2 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim11Q99PQ2 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim11Q99PQ2 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim11Q99PQ2 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC14.09□□□□□ -0.15
Trim11Q99PQ2 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC14.09□□□□□ -0.15
Trim11Q99PQ2 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim11Q99PQ2 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim11Q99PQ2 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim11Q99PQ2 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Trim11Q99PQ2 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim11Q99PQ2 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
Trim11Q99PQ2 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim11Q99PQ2 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Trim11Q99PQ2 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Trim11Q99PQ2 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Trim11Q99PQ2 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC14.08□□□□□ -0.15
Trim11Q99PQ2 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim11Q99PQ2 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim11Q99PQ2 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC14.08□□□□□ -0.16
Trim11Q99PQ2 Paupar-201ENSMUST00000194826 3482 ntBASIC14.08□□□□□ -0.16
Trim11Q99PQ2 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim11Q99PQ2 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trim11Q99PQ2 Gm11434-201ENSMUST00000122379 629 ntBASIC14.08□□□□□ -0.16
Trim11Q99PQ2 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim11Q99PQ2 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC14.08□□□□□ -0.16
Trim11Q99PQ2 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC14.08□□□□□ -0.16
Trim11Q99PQ2 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC14.08□□□□□ -0.16
Trim11Q99PQ2 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC14.08□□□□□ -0.16
Trim11Q99PQ2 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Trim11Q99PQ2 Gm8565-201ENSMUST00000183259 1014 ntBASIC14.08□□□□□ -0.16
Trim11Q99PQ2 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim11Q99PQ2 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC14.08□□□□□ -0.16
Trim11Q99PQ2 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim11Q99PQ2 Gm44958-201ENSMUST00000203734 736 ntBASIC14.08□□□□□ -0.16
Trim11Q99PQ2 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Trim11Q99PQ2 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim11Q99PQ2 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim11Q99PQ2 Gm10076-201ENSMUST00000073238 384 ntBASIC14.08□□□□□ -0.16
Trim11Q99PQ2 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim11Q99PQ2 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim11Q99PQ2 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim11Q99PQ2 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim11Q99PQ2 Gm9361-201ENSMUST00000198695 1507 ntBASIC14.08□□□□□ -0.16
Trim11Q99PQ2 Dctn4-202ENSMUST00000223590 1530 ntBASIC14.08□□□□□ -0.16
Trim11Q99PQ2 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC14.08□□□□□ -0.16
Trim11Q99PQ2 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim11Q99PQ2 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim11Q99PQ2 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim11Q99PQ2 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim11Q99PQ2 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim11Q99PQ2 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim11Q99PQ2 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim11Q99PQ2 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim11Q99PQ2 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Trim11Q99PQ2 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim11Q99PQ2 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trim11Q99PQ2 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim11Q99PQ2 Gm45053-201ENSMUST00000206112 2499 ntBASIC14.07□□□□□ -0.16
Trim11Q99PQ2 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim11Q99PQ2 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC14.07□□□□□ -0.16
Trim11Q99PQ2 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim11Q99PQ2 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trim11Q99PQ2 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim11Q99PQ2 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim11Q99PQ2 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim11Q99PQ2 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Trim11Q99PQ2 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim11Q99PQ2 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim11Q99PQ2 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim11Q99PQ2 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim11Q99PQ2 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trim11Q99PQ2 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.07□□□□□ -0.16
Trim11Q99PQ2 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim11Q99PQ2 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.07□□□□□ -0.16
Trim11Q99PQ2 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim11Q99PQ2 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim11Q99PQ2 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC14.07□□□□□ -0.16
Trim11Q99PQ2 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms