Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.13□□□□□ -0.47
Trim16Q99PP9 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.13□□□□□ -0.47
Trim16Q99PP9 Gm8099-201ENSMUST00000200510 742 ntBASIC12.13□□□□□ -0.47
Trim16Q99PP9 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.13□□□□□ -0.47
Trim16Q99PP9 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim16Q99PP9 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim16Q99PP9 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim16Q99PP9 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.13□□□□□ -0.47
Trim16Q99PP9 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim16Q99PP9 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim16Q99PP9 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim16Q99PP9 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trim16Q99PP9 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim16Q99PP9 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim16Q99PP9 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim16Q99PP9 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.13□□□□□ -0.47
Trim16Q99PP9 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim16Q99PP9 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trim16Q99PP9 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim16Q99PP9 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trim16Q99PP9 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Trim16Q99PP9 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Trim16Q99PP9 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim16Q99PP9 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim16Q99PP9 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim16Q99PP9 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim16Q99PP9 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.12□□□□□ -0.47
Trim16Q99PP9 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.12□□□□□ -0.47
Trim16Q99PP9 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim16Q99PP9 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim16Q99PP9 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim16Q99PP9 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trim16Q99PP9 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trim16Q99PP9 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim16Q99PP9 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Trim16Q99PP9 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trim16Q99PP9 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trim16Q99PP9 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trim16Q99PP9 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trim16Q99PP9 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.12□□□□□ -0.47
Trim16Q99PP9 Gm37424-201ENSMUST00000191727 561 ntBASIC12.12□□□□□ -0.47
Trim16Q99PP9 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.12□□□□□ -0.47
Trim16Q99PP9 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.12□□□□□ -0.47
Trim16Q99PP9 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.12□□□□□ -0.47
Trim16Q99PP9 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim16Q99PP9 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.12□□□□□ -0.47
Trim16Q99PP9 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim16Q99PP9 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim16Q99PP9 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trim16Q99PP9 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trim16Q99PP9 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim16Q99PP9 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trim16Q99PP9 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim16Q99PP9 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Trim16Q99PP9 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Trim16Q99PP9 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim16Q99PP9 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim16Q99PP9 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim16Q99PP9 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim16Q99PP9 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim16Q99PP9 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim16Q99PP9 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trim16Q99PP9 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim16Q99PP9 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Trim16Q99PP9 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim16Q99PP9 Dopey2-207ENSMUST00000227156 7340 ntBASIC12.11□□□□□ -0.47
Trim16Q99PP9 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.11□□□□□ -0.47
Trim16Q99PP9 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim16Q99PP9 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim16Q99PP9 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim16Q99PP9 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim16Q99PP9 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim16Q99PP9 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trim16Q99PP9 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim16Q99PP9 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim16Q99PP9 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trim16Q99PP9 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.11□□□□□ -0.47
Trim16Q99PP9 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim16Q99PP9 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim16Q99PP9 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim16Q99PP9 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim16Q99PP9 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim16Q99PP9 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.11□□□□□ -0.47
Trim16Q99PP9 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim16Q99PP9 Gm11591-201ENSMUST00000120063 702 ntBASIC12.11□□□□□ -0.47
Trim16Q99PP9 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim16Q99PP9 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.11□□□□□ -0.47
Trim16Q99PP9 Gm25261-201ENSMUST00000157416 134 ntBASIC12.11□□□□□ -0.47
Trim16Q99PP9 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim16Q99PP9 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim16Q99PP9 Gm6222-202ENSMUST00000182143 629 ntBASIC12.11□□□□□ -0.47
Trim16Q99PP9 Gm5370-201ENSMUST00000187187 574 ntBASIC12.11□□□□□ -0.47
Trim16Q99PP9 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.11□□□□□ -0.47
Trim16Q99PP9 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim16Q99PP9 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.11□□□□□ -0.47
Trim16Q99PP9 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.11□□□□□ -0.47
Trim16Q99PP9 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim16Q99PP9 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim16Q99PP9 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim16Q99PP9 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms