Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk9Q99J95 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk9Q99J95 Mir6392-201ENSMUST00000184924 108 ntBASIC12.48□□□□□ -0.41
Cdk9Q99J95 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk9Q99J95 Gm6745-201ENSMUST00000199216 526 ntBASIC12.48□□□□□ -0.41
Cdk9Q99J95 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.48□□□□□ -0.41
Cdk9Q99J95 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.48□□□□□ -0.41
Cdk9Q99J95 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.48□□□□□ -0.41
Cdk9Q99J95 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Cdk9Q99J95 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.48□□□□□ -0.41
Cdk9Q99J95 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk9Q99J95 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.48□□□□□ -0.41
Cdk9Q99J95 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk9Q99J95 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk9Q99J95 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk9Q99J95 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.48□□□□□ -0.41
Cdk9Q99J95 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.48□□□□□ -0.41
Cdk9Q99J95 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk9Q99J95 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk9Q99J95 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk9Q99J95 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk9Q99J95 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk9Q99J95 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk9Q99J95 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk9Q99J95 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.47□□□□□ -0.41
Cdk9Q99J95 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Cdk9Q99J95 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.47□□□□□ -0.41
Cdk9Q99J95 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk9Q99J95 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk9Q99J95 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Cdk9Q99J95 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.47□□□□□ -0.41
Cdk9Q99J95 Gm12490-201ENSMUST00000120255 560 ntBASIC12.47□□□□□ -0.41
Cdk9Q99J95 Gm12091-201ENSMUST00000146791 830 ntBASIC12.47□□□□□ -0.41
Cdk9Q99J95 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.47□□□□□ -0.41
Cdk9Q99J95 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.47□□□□□ -0.41
Cdk9Q99J95 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.47□□□□□ -0.41
Cdk9Q99J95 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.47□□□□□ -0.41
Cdk9Q99J95 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.47□□□□□ -0.41
Cdk9Q99J95 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.47□□□□□ -0.41
Cdk9Q99J95 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.47□□□□□ -0.41
Cdk9Q99J95 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Cdk9Q99J95 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk9Q99J95 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk9Q99J95 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Cdk9Q99J95 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk9Q99J95 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk9Q99J95 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk9Q99J95 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk9Q99J95 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cdk9Q99J95 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk9Q99J95 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk9Q99J95 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cdk9Q99J95 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.47□□□□□ -0.41
Cdk9Q99J95 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk9Q99J95 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Cdk9Q99J95 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk9Q99J95 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk9Q99J95 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk9Q99J95 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Cdk9Q99J95 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.47□□□□□ -0.41
Cdk9Q99J95 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Cdk9Q99J95 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.47□□□□□ -0.41
Cdk9Q99J95 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk9Q99J95 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cdk9Q99J95 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdk9Q99J95 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdk9Q99J95 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdk9Q99J95 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.46□□□□□ -0.41
Cdk9Q99J95 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cdk9Q99J95 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdk9Q99J95 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdk9Q99J95 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cdk9Q99J95 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.46□□□□□ -0.41
Cdk9Q99J95 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cdk9Q99J95 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.46□□□□□ -0.41
Cdk9Q99J95 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdk9Q99J95 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdk9Q99J95 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Cdk9Q99J95 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cdk9Q99J95 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.46□□□□□ -0.41
Cdk9Q99J95 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdk9Q99J95 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdk9Q99J95 Gm16372-201ENSMUST00000073088 450 ntBASIC12.46□□□□□ -0.41
Cdk9Q99J95 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdk9Q99J95 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Cdk9Q99J95 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdk9Q99J95 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
Cdk9Q99J95 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdk9Q99J95 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdk9Q99J95 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Cdk9Q99J95 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdk9Q99J95 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12.46□□□□□ -0.42
Cdk9Q99J95 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.42
Cdk9Q99J95 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdk9Q99J95 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdk9Q99J95 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Cdk9Q99J95 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.42
Cdk9Q99J95 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdk9Q99J95 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdk9Q99J95 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms