Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfc4Q99J62 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Rfc4Q99J62 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.24□□□□□ -0.13
Rfc4Q99J62 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfc4Q99J62 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rfc4Q99J62 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfc4Q99J62 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfc4Q99J62 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rfc4Q99J62 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfc4Q99J62 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfc4Q99J62 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfc4Q99J62 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rfc4Q99J62 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfc4Q99J62 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfc4Q99J62 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Rfc4Q99J62 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Rfc4Q99J62 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rfc4Q99J62 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC14.24□□□□□ -0.13
Rfc4Q99J62 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Rfc4Q99J62 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rfc4Q99J62 Gm6905-201ENSMUST00000205729 511 ntBASIC14.24□□□□□ -0.13
Rfc4Q99J62 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC14.24□□□□□ -0.13
Rfc4Q99J62 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rfc4Q99J62 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Rfc4Q99J62 Gm26448-201ENSMUST00000082446 203 ntBASIC14.24□□□□□ -0.13
Rfc4Q99J62 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC14.24□□□□□ -0.13
Rfc4Q99J62 Gm8617-201ENSMUST00000118796 2222 ntBASIC14.24□□□□□ -0.13
Rfc4Q99J62 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfc4Q99J62 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfc4Q99J62 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfc4Q99J62 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rfc4Q99J62 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Rfc4Q99J62 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfc4Q99J62 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfc4Q99J62 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfc4Q99J62 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfc4Q99J62 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC14.24□□□□□ -0.13
Rfc4Q99J62 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC14.24□□□□□ -0.13
Rfc4Q99J62 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rfc4Q99J62 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rfc4Q99J62 Retreg1-206ENSMUST00000228306 1430 ntBASIC14.24□□□□□ -0.13
Rfc4Q99J62 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC14.24□□□□□ -0.13
Rfc4Q99J62 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc4Q99J62 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc4Q99J62 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Rfc4Q99J62 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Rfc4Q99J62 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.23□□□□□ -0.13
Rfc4Q99J62 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc4Q99J62 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc4Q99J62 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Rfc4Q99J62 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc4Q99J62 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc4Q99J62 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc4Q99J62 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC14.23□□□□□ -0.13
Rfc4Q99J62 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc4Q99J62 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc4Q99J62 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc4Q99J62 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC14.23□□□□□ -0.13
Rfc4Q99J62 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc4Q99J62 Gm24231-201ENSMUST00000104315 133 ntBASIC14.23□□□□□ -0.13
Rfc4Q99J62 Gm24891-201ENSMUST00000104391 136 ntBASIC14.23□□□□□ -0.13
Rfc4Q99J62 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Rfc4Q99J62 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc4Q99J62 Gm14460-201ENSMUST00000121511 639 ntBASIC14.23□□□□□ -0.13
Rfc4Q99J62 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC14.23□□□□□ -0.13
Rfc4Q99J62 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Rfc4Q99J62 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Rfc4Q99J62 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc4Q99J62 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC14.23□□□□□ -0.13
Rfc4Q99J62 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC14.23□□□□□ -0.13
Rfc4Q99J62 Gm5733-201ENSMUST00000190232 939 ntBASIC14.23□□□□□ -0.13
Rfc4Q99J62 Gm43184-201ENSMUST00000197247 542 ntBASIC14.23□□□□□ -0.13
Rfc4Q99J62 Gm43058-201ENSMUST00000197645 625 ntBASIC14.23□□□□□ -0.13
Rfc4Q99J62 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc4Q99J62 Gm5455-201ENSMUST00000058710 715 ntBASIC14.23□□□□□ -0.13
Rfc4Q99J62 Ginm1-202ENSMUST00000065124 300 ntBASIC14.23□□□□□ -0.13
Rfc4Q99J62 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc4Q99J62 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc4Q99J62 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC14.23□□□□□ -0.13
Rfc4Q99J62 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc4Q99J62 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC14.23□□□□□ -0.13
Rfc4Q99J62 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc4Q99J62 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Rfc4Q99J62 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc4Q99J62 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc4Q99J62 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC14.23□□□□□ -0.13
Rfc4Q99J62 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc4Q99J62 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC14.22□□□□□ -0.13
Rfc4Q99J62 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Rfc4Q99J62 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc4Q99J62 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.22□□□□□ -0.13
Rfc4Q99J62 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc4Q99J62 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc4Q99J62 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc4Q99J62 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Rfc4Q99J62 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc4Q99J62 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc4Q99J62 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc4Q99J62 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Rfc4Q99J62 Gm23085-201ENSMUST00000157849 293 ntBASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms