Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdha9Q91Y11 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdha9Q91Y11 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdha9Q91Y11 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdha9Q91Y11 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdha9Q91Y11 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdha9Q91Y11 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdha9Q91Y11 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdha9Q91Y11 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Pcdha9Q91Y11 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pcdha9Q91Y11 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pcdha9Q91Y11 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Pcdha9Q91Y11 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdha9Q91Y11 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13.14□□□□□ -0.31
Pcdha9Q91Y11 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Pcdha9Q91Y11 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdha9Q91Y11 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdha9Q91Y11 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Pcdha9Q91Y11 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdha9Q91Y11 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Pcdha9Q91Y11 Gm23912-201ENSMUST00000104687 87 ntBASIC13.14□□□□□ -0.31
Pcdha9Q91Y11 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Pcdha9Q91Y11 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC13.14□□□□□ -0.31
Pcdha9Q91Y11 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdha9Q91Y11 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdha9Q91Y11 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdha9Q91Y11 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Pcdha9Q91Y11 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC13.14□□□□□ -0.31
Pcdha9Q91Y11 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC13.14□□□□□ -0.31
Pcdha9Q91Y11 Gm7783-201ENSMUST00000204795 781 ntBASIC13.14□□□□□ -0.31
Pcdha9Q91Y11 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC13.14□□□□□ -0.31
Pcdha9Q91Y11 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC13.14□□□□□ -0.31
Pcdha9Q91Y11 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC13.14□□□□□ -0.31
Pcdha9Q91Y11 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdha9Q91Y11 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdha9Q91Y11 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdha9Q91Y11 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Pcdha9Q91Y11 Olfr582-201ENSMUST00000098212 960 ntBASIC13.14□□□□□ -0.31
Pcdha9Q91Y11 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdha9Q91Y11 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdha9Q91Y11 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdha9Q91Y11 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.14□□□□□ -0.31
Pcdha9Q91Y11 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdha9Q91Y11 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Pcdha9Q91Y11 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdha9Q91Y11 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdha9Q91Y11 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.14□□□□□ -0.31
Pcdha9Q91Y11 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdha9Q91Y11 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdha9Q91Y11 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdha9Q91Y11 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdha9Q91Y11 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdha9Q91Y11 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Pcdha9Q91Y11 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdha9Q91Y11 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdha9Q91Y11 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Pcdha9Q91Y11 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdha9Q91Y11 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Pcdha9Q91Y11 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdha9Q91Y11 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdha9Q91Y11 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdha9Q91Y11 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdha9Q91Y11 Gm12015-201ENSMUST00000117065 843 ntBASIC13.13□□□□□ -0.31
Pcdha9Q91Y11 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC13.13□□□□□ -0.31
Pcdha9Q91Y11 Gm14381-201ENSMUST00000122105 414 ntBASIC13.13□□□□□ -0.31
Pcdha9Q91Y11 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdha9Q91Y11 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdha9Q91Y11 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC13.13□□□□□ -0.31
Pcdha9Q91Y11 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdha9Q91Y11 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdha9Q91Y11 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.13□□□□□ -0.31
Pcdha9Q91Y11 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdha9Q91Y11 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdha9Q91Y11 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.13□□□□□ -0.31
Pcdha9Q91Y11 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdha9Q91Y11 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.13□□□□□ -0.31
Pcdha9Q91Y11 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC13.13□□□□□ -0.31
Pcdha9Q91Y11 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdha9Q91Y11 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdha9Q91Y11 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC13.13□□□□□ -0.31
Pcdha9Q91Y11 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdha9Q91Y11 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdha9Q91Y11 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdha9Q91Y11 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Pcdha9Q91Y11 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Pcdha9Q91Y11 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.13□□□□□ -0.31
Pcdha9Q91Y11 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Pcdha9Q91Y11 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdha9Q91Y11 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Pcdha9Q91Y11 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdha9Q91Y11 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdha9Q91Y11 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Pcdha9Q91Y11 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdha9Q91Y11 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdha9Q91Y11 Gm18626-201ENSMUST00000221512 1409 ntBASIC13.13□□□□□ -0.31
Pcdha9Q91Y11 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdha9Q91Y11 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdha9Q91Y11 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdha9Q91Y11 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdha9Q91Y11 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms