Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Gm27552-201ENSMUST00000183351 62 ntBASIC12.97□□□□□ -0.33
Pcdhb18Q91Y02 Gm27844-201ENSMUST00000183613 62 ntBASIC12.97□□□□□ -0.33
Pcdhb18Q91Y02 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb18Q91Y02 Gm19187-201ENSMUST00000206781 892 ntBASIC12.97□□□□□ -0.33
Pcdhb18Q91Y02 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb18Q91Y02 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.97□□□□□ -0.33
Pcdhb18Q91Y02 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb18Q91Y02 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Pcdhb18Q91Y02 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb18Q91Y02 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb18Q91Y02 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.97□□□□□ -0.33
Pcdhb18Q91Y02 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb18Q91Y02 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb18Q91Y02 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb18Q91Y02 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb18Q91Y02 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb18Q91Y02 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb18Q91Y02 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Pcdhb18Q91Y02 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb18Q91Y02 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb18Q91Y02 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb18Q91Y02 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb18Q91Y02 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb18Q91Y02 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb18Q91Y02 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb18Q91Y02 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb18Q91Y02 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb18Q91Y02 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb18Q91Y02 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb18Q91Y02 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb18Q91Y02 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb18Q91Y02 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.96□□□□□ -0.33
Pcdhb18Q91Y02 Gm22334-201ENSMUST00000158070 133 ntBASIC12.96□□□□□ -0.33
Pcdhb18Q91Y02 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.96□□□□□ -0.33
Pcdhb18Q91Y02 Gm29615-201ENSMUST00000185371 697 ntBASIC12.96□□□□□ -0.33
Pcdhb18Q91Y02 Gm28224-201ENSMUST00000186078 697 ntBASIC12.96□□□□□ -0.33
Pcdhb18Q91Y02 Gm29001-201ENSMUST00000186177 697 ntBASIC12.96□□□□□ -0.33
Pcdhb18Q91Y02 Gm28292-201ENSMUST00000186593 697 ntBASIC12.96□□□□□ -0.33
Pcdhb18Q91Y02 Gm28101-201ENSMUST00000187608 697 ntBASIC12.96□□□□□ -0.33
Pcdhb18Q91Y02 Gm29076-201ENSMUST00000187689 697 ntBASIC12.96□□□□□ -0.33
Pcdhb18Q91Y02 Gm28302-201ENSMUST00000187931 697 ntBASIC12.96□□□□□ -0.33
Pcdhb18Q91Y02 Gm28646-201ENSMUST00000188220 697 ntBASIC12.96□□□□□ -0.33
Pcdhb18Q91Y02 Gm28205-201ENSMUST00000189177 697 ntBASIC12.96□□□□□ -0.33
Pcdhb18Q91Y02 Gm29032-201ENSMUST00000189797 697 ntBASIC12.96□□□□□ -0.33
Pcdhb18Q91Y02 Gm28695-201ENSMUST00000190300 697 ntBASIC12.96□□□□□ -0.33
Pcdhb18Q91Y02 Gm37448-201ENSMUST00000192795 697 ntBASIC12.96□□□□□ -0.33
Pcdhb18Q91Y02 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb18Q91Y02 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb18Q91Y02 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb18Q91Y02 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb18Q91Y02 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.96□□□□□ -0.33
Pcdhb18Q91Y02 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb18Q91Y02 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.96□□□□□ -0.34
Pcdhb18Q91Y02 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhb18Q91Y02 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhb18Q91Y02 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.96□□□□□ -0.34
Pcdhb18Q91Y02 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb18Q91Y02 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb18Q91Y02 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb18Q91Y02 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.95□□□□□ -0.34
Pcdhb18Q91Y02 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb18Q91Y02 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb18Q91Y02 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Pcdhb18Q91Y02 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Pcdhb18Q91Y02 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb18Q91Y02 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb18Q91Y02 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb18Q91Y02 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb18Q91Y02 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb18Q91Y02 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Pcdhb18Q91Y02 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.95□□□□□ -0.34
Pcdhb18Q91Y02 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Pcdhb18Q91Y02 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.95□□□□□ -0.34
Pcdhb18Q91Y02 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb18Q91Y02 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.95□□□□□ -0.34
Pcdhb18Q91Y02 Rmrp-201ENSMUST00000157463 271 ntBASIC12.95□□□□□ -0.34
Pcdhb18Q91Y02 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.95□□□□□ -0.34
Pcdhb18Q91Y02 Gm20426-201ENSMUST00000173657 440 ntBASIC12.95□□□□□ -0.34
Pcdhb18Q91Y02 Gm27627-201ENSMUST00000183644 150 ntBASIC12.95□□□□□ -0.34
Pcdhb18Q91Y02 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb18Q91Y02 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.95□□□□□ -0.34
Pcdhb18Q91Y02 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.95□□□□□ -0.34
Pcdhb18Q91Y02 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Pcdhb18Q91Y02 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb18Q91Y02 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.95□□□□□ -0.34
Pcdhb18Q91Y02 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.95□□□□□ -0.34
Pcdhb18Q91Y02 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb18Q91Y02 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb18Q91Y02 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Pcdhb18Q91Y02 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb18Q91Y02 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb18Q91Y02 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Pcdhb18Q91Y02 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb18Q91Y02 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb18Q91Y02 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb18Q91Y02 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Pcdhb18Q91Y02 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb18Q91Y02 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Pcdhb18Q91Y02 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb18Q91Y02 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms