Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 Gm45784-201ENSMUST00000188360 142 ntBASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 Gm32025-201ENSMUST00000217960 307 ntBASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Pcdhga3Q91XY5 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdhga3Q91XY5 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.06□□□□□ -0.64
Pcdhga3Q91XY5 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Pcdhga3Q91XY5 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdhga3Q91XY5 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdhga3Q91XY5 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdhga3Q91XY5 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdhga3Q91XY5 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.06□□□□□ -0.64
Pcdhga3Q91XY5 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdhga3Q91XY5 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdhga3Q91XY5 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdhga3Q91XY5 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdhga3Q91XY5 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdhga3Q91XY5 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdhga3Q91XY5 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.06□□□□□ -0.64
Pcdhga3Q91XY5 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.06□□□□□ -0.64
Pcdhga3Q91XY5 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
Pcdhga3Q91XY5 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdhga3Q91XY5 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdhga3Q91XY5 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.06□□□□□ -0.64
Pcdhga3Q91XY5 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdhga3Q91XY5 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.06□□□□□ -0.64
Pcdhga3Q91XY5 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.06□□□□□ -0.64
Pcdhga3Q91XY5 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.06□□□□□ -0.64
Pcdhga3Q91XY5 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.06□□□□□ -0.64
Pcdhga3Q91XY5 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdhga3Q91XY5 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.06□□□□□ -0.64
Pcdhga3Q91XY5 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.06□□□□□ -0.64
Pcdhga3Q91XY5 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.06□□□□□ -0.64
Pcdhga3Q91XY5 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.06□□□□□ -0.64
Pcdhga3Q91XY5 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdhga3Q91XY5 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdhga3Q91XY5 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Pcdhga3Q91XY5 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Pcdhga3Q91XY5 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdhga3Q91XY5 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdhga3Q91XY5 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdhga3Q91XY5 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdhga3Q91XY5 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdhga3Q91XY5 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdhga3Q91XY5 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Pcdhga3Q91XY5 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Pcdhga3Q91XY5 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdhga3Q91XY5 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdhga3Q91XY5 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.05□□□□□ -0.64
Pcdhga3Q91XY5 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdhga3Q91XY5 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.05□□□□□ -0.64
Pcdhga3Q91XY5 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdhga3Q91XY5 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdhga3Q91XY5 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdhga3Q91XY5 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdhga3Q91XY5 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdhga3Q91XY5 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.05□□□□□ -0.64
Pcdhga3Q91XY5 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdhga3Q91XY5 Gm13226-201ENSMUST00000117838 404 ntBASIC11.05□□□□□ -0.64
Pcdhga3Q91XY5 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.05□□□□□ -0.64
Pcdhga3Q91XY5 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.05□□□□□ -0.64
Pcdhga3Q91XY5 Gm25927-201ENSMUST00000175058 117 ntBASIC11.05□□□□□ -0.64
Pcdhga3Q91XY5 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdhga3Q91XY5 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms