Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpa1Q8VEE4 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpa1Q8VEE4 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpa1Q8VEE4 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.52□□□□□ -0.41
Rpa1Q8VEE4 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpa1Q8VEE4 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.52□□□□□ -0.41
Rpa1Q8VEE4 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpa1Q8VEE4 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpa1Q8VEE4 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpa1Q8VEE4 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpa1Q8VEE4 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rpa1Q8VEE4 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpa1Q8VEE4 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rpa1Q8VEE4 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpa1Q8VEE4 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpa1Q8VEE4 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 Gm36987-201ENSMUST00000194704 2979 ntBASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 Gm5354-201ENSMUST00000182417 973 ntBASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 Mir6977-201ENSMUST00000184960 64 ntBASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa1Q8VEE4 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.5□□□□□ -0.41
Rpa1Q8VEE4 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpa1Q8VEE4 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rpa1Q8VEE4 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rpa1Q8VEE4 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Rpa1Q8VEE4 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rpa1Q8VEE4 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpa1Q8VEE4 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpa1Q8VEE4 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpa1Q8VEE4 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Rpa1Q8VEE4 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rpa1Q8VEE4 Gm36957-201ENSMUST00000192982 2824 ntBASIC12.5□□□□□ -0.41
Rpa1Q8VEE4 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpa1Q8VEE4 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Rpa1Q8VEE4 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpa1Q8VEE4 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.5□□□□□ -0.41
Rpa1Q8VEE4 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.5□□□□□ -0.41
Rpa1Q8VEE4 Gm5687-201ENSMUST00000118252 640 ntBASIC12.5□□□□□ -0.41
Rpa1Q8VEE4 Gm14921-201ENSMUST00000118643 908 ntBASIC12.5□□□□□ -0.41
Rpa1Q8VEE4 Gm15321-201ENSMUST00000121290 288 ntBASIC12.5□□□□□ -0.41
Rpa1Q8VEE4 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.5□□□□□ -0.41
Rpa1Q8VEE4 Gm23757-201ENSMUST00000158353 100 ntBASIC12.5□□□□□ -0.41
Rpa1Q8VEE4 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Rpa1Q8VEE4 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.5□□□□□ -0.41
Rpa1Q8VEE4 Gm18351-201ENSMUST00000188646 883 ntBASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms