Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC17.4■□□□□ 0.38
Cd109Q8R422 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cd109Q8R422 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cd109Q8R422 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cd109Q8R422 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC17.39■□□□□ 0.38
Cd109Q8R422 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Cd109Q8R422 Gm17831-201ENSMUST00000205579 900 ntBASIC17.39■□□□□ 0.38
Cd109Q8R422 Gm10752-201ENSMUST00000218348 729 ntBASIC17.39■□□□□ 0.38
Cd109Q8R422 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cd109Q8R422 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cd109Q8R422 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cd109Q8R422 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Cd109Q8R422 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cd109Q8R422 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cd109Q8R422 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Cd109Q8R422 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cd109Q8R422 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cd109Q8R422 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cd109Q8R422 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cd109Q8R422 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Cd109Q8R422 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cd109Q8R422 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cd109Q8R422 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cd109Q8R422 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC17.39■□□□□ 0.37
Cd109Q8R422 Gm43807-201ENSMUST00000200678 1781 ntBASIC17.39■□□□□ 0.37
Cd109Q8R422 Gm8731-201ENSMUST00000118088 412 ntBASIC17.38■□□□□ 0.37
Cd109Q8R422 Gm14665-201ENSMUST00000122294 557 ntBASIC17.38■□□□□ 0.37
Cd109Q8R422 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC17.38■□□□□ 0.37
Cd109Q8R422 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cd109Q8R422 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Cd109Q8R422 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd109Q8R422 Gm10731-201ENSMUST00000181171 448 ntBASIC17.38■□□□□ 0.37
Cd109Q8R422 Mir8115-201ENSMUST00000184992 119 ntBASIC17.38■□□□□ 0.37
Cd109Q8R422 Gm45550-201ENSMUST00000209380 946 ntBASIC17.38■□□□□ 0.37
Cd109Q8R422 CT009713.8-202ENSMUST00000224732 385 ntBASIC17.38■□□□□ 0.37
Cd109Q8R422 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd109Q8R422 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd109Q8R422 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Cd109Q8R422 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd109Q8R422 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd109Q8R422 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd109Q8R422 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd109Q8R422 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Cd109Q8R422 Gm13910-201ENSMUST00000121752 1428 ntBASIC17.38■□□□□ 0.37
Cd109Q8R422 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cd109Q8R422 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd109Q8R422 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd109Q8R422 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd109Q8R422 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd109Q8R422 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd109Q8R422 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC17.38■□□□□ 0.37
Cd109Q8R422 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC17.38■□□□□ 0.37
Cd109Q8R422 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC17.38■□□□□ 0.37
Cd109Q8R422 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd109Q8R422 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Cd109Q8R422 Gm38117-201ENSMUST00000194653 939 ntBASIC17.38■□□□□ 0.37
Cd109Q8R422 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC17.38■□□□□ 0.37
Cd109Q8R422 Gm45219-201ENSMUST00000205602 465 ntBASIC17.38■□□□□ 0.37
Cd109Q8R422 Gm9132-201ENSMUST00000210182 832 ntBASIC17.38■□□□□ 0.37
Cd109Q8R422 Gm45398-201ENSMUST00000210561 165 ntBASIC17.38■□□□□ 0.37
Cd109Q8R422 AC153505.1-201ENSMUST00000218819 1071 ntBASIC17.38■□□□□ 0.37
Cd109Q8R422 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd109Q8R422 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd109Q8R422 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cd109Q8R422 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd109Q8R422 AC158355.1-201ENSMUST00000215895 1705 ntBASIC17.37■□□□□ 0.37
Cd109Q8R422 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd109Q8R422 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC17.37■□□□□ 0.37
Cd109Q8R422 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd109Q8R422 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cd109Q8R422 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
Cd109Q8R422 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cd109Q8R422 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
Cd109Q8R422 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Cd109Q8R422 Gm43447-201ENSMUST00000198471 1535 ntBASIC17.37■□□□□ 0.37
Cd109Q8R422 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd109Q8R422 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Cd109Q8R422 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cd109Q8R422 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cd109Q8R422 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd109Q8R422 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cd109Q8R422 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd109Q8R422 Gm6189-201ENSMUST00000164487 2082 ntBASIC17.37■□□□□ 0.37
Cd109Q8R422 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cd109Q8R422 Gm13888-201ENSMUST00000119148 422 ntBASIC17.37■□□□□ 0.37
Cd109Q8R422 Gm11660-201ENSMUST00000120955 412 ntBASIC17.37■□□□□ 0.37
Cd109Q8R422 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC17.37■□□□□ 0.37
Cd109Q8R422 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC17.37■□□□□ 0.37
Cd109Q8R422 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC17.37■□□□□ 0.37
Cd109Q8R422 Gm19287-201ENSMUST00000203190 358 ntBASIC17.37■□□□□ 0.37
Cd109Q8R422 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cd109Q8R422 AC122408.1-201ENSMUST00000218949 218 ntBASIC17.37■□□□□ 0.37
Cd109Q8R422 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC17.37■□□□□ 0.37
Cd109Q8R422 AC171241.1-201ENSMUST00000228144 1166 ntBASIC17.37■□□□□ 0.37
Cd109Q8R422 AC159103.1-201ENSMUST00000228325 429 ntBASIC17.37■□□□□ 0.37
Cd109Q8R422 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd109Q8R422 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC17.37■□□□□ 0.37
Cd109Q8R422 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cd109Q8R422 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC17.36■□□□□ 0.37
Cd109Q8R422 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms