Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Zcchc9Q8R1J3 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Zcchc9Q8R1J3 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.4□□□□□ -0.42
Zcchc9Q8R1J3 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Zcchc9Q8R1J3 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Zcchc9Q8R1J3 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Zcchc9Q8R1J3 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Zcchc9Q8R1J3 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Zcchc9Q8R1J3 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Zcchc9Q8R1J3 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.4□□□□□ -0.42
Zcchc9Q8R1J3 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.4□□□□□ -0.42
Zcchc9Q8R1J3 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.4□□□□□ -0.42
Zcchc9Q8R1J3 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Zcchc9Q8R1J3 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Zcchc9Q8R1J3 Gm43947-201ENSMUST00000203019 959 ntBASIC12.4□□□□□ -0.42
Zcchc9Q8R1J3 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Zcchc9Q8R1J3 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.4□□□□□ -0.42
Zcchc9Q8R1J3 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Zcchc9Q8R1J3 Gzmn-202ENSMUST00000225535 989 ntBASIC12.4□□□□□ -0.42
Zcchc9Q8R1J3 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Zcchc9Q8R1J3 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Zcchc9Q8R1J3 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Zcchc9Q8R1J3 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Zcchc9Q8R1J3 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.4□□□□□ -0.42
Zcchc9Q8R1J3 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.4□□□□□ -0.42
Zcchc9Q8R1J3 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Zcchc9Q8R1J3 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Zcchc9Q8R1J3 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.4□□□□□ -0.42
Zcchc9Q8R1J3 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.4□□□□□ -0.42
Zcchc9Q8R1J3 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.4□□□□□ -0.42
Zcchc9Q8R1J3 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Zcchc9Q8R1J3 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Zcchc9Q8R1J3 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Zcchc9Q8R1J3 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Zcchc9Q8R1J3 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Zcchc9Q8R1J3 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Zcchc9Q8R1J3 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Zcchc9Q8R1J3 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Zcchc9Q8R1J3 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Zcchc9Q8R1J3 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Gm12291-201ENSMUST00000121627 311 ntBASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Gm10312-201ENSMUST00000078515 489 ntBASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Zcchc9Q8R1J3 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 246.4 ms