Protein–RNA interactions for Protein: Q8CE13

Ccdc17, Coiled-coil domain-containing protein 17, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc17Q8CE13 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc17Q8CE13 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc17Q8CE13 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.91□□□□□ -0.34
Ccdc17Q8CE13 Gm14999-201ENSMUST00000121039 624 ntBASIC12.91□□□□□ -0.34
Ccdc17Q8CE13 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Ccdc17Q8CE13 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc17Q8CE13 Rprl1-202ENSMUST00000198476 238 ntBASIC12.91□□□□□ -0.34
Ccdc17Q8CE13 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.91□□□□□ -0.34
Ccdc17Q8CE13 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.91□□□□□ -0.34
Ccdc17Q8CE13 Gm18730-201ENSMUST00000218038 343 ntBASIC12.91□□□□□ -0.34
Ccdc17Q8CE13 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc17Q8CE13 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.91□□□□□ -0.34
Ccdc17Q8CE13 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc17Q8CE13 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc17Q8CE13 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc17Q8CE13 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc17Q8CE13 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc17Q8CE13 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc17Q8CE13 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc17Q8CE13 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc17Q8CE13 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Ccdc17Q8CE13 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc17Q8CE13 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.91□□□□□ -0.34
Ccdc17Q8CE13 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc17Q8CE13 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Ccdc17Q8CE13 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc17Q8CE13 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc17Q8CE13 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc17Q8CE13 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc17Q8CE13 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc17Q8CE13 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc17Q8CE13 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc17Q8CE13 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc17Q8CE13 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc17Q8CE13 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc17Q8CE13 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc17Q8CE13 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc17Q8CE13 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc17Q8CE13 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.9□□□□□ -0.34
Ccdc17Q8CE13 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.9□□□□□ -0.34
Ccdc17Q8CE13 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.9□□□□□ -0.34
Ccdc17Q8CE13 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Ccdc17Q8CE13 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.9□□□□□ -0.34
Ccdc17Q8CE13 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ccdc17Q8CE13 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.9□□□□□ -0.34
Ccdc17Q8CE13 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC12.9□□□□□ -0.34
Ccdc17Q8CE13 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.9□□□□□ -0.34
Ccdc17Q8CE13 Gm17812-201ENSMUST00000204935 318 ntBASIC12.9□□□□□ -0.34
Ccdc17Q8CE13 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.9□□□□□ -0.34
Ccdc17Q8CE13 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.9□□□□□ -0.34
Ccdc17Q8CE13 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc17Q8CE13 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc17Q8CE13 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.9□□□□□ -0.34
Ccdc17Q8CE13 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc17Q8CE13 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc17Q8CE13 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc17Q8CE13 Gm43081-201ENSMUST00000199082 1380 ntBASIC12.9□□□□□ -0.34
Ccdc17Q8CE13 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc17Q8CE13 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc17Q8CE13 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.35
Ccdc17Q8CE13 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.9□□□□□ -0.35
Ccdc17Q8CE13 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.9□□□□□ -0.35
Ccdc17Q8CE13 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Ccdc17Q8CE13 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Ccdc17Q8CE13 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Ccdc17Q8CE13 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc17Q8CE13 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc17Q8CE13 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc17Q8CE13 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc17Q8CE13 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.89□□□□□ -0.35
Ccdc17Q8CE13 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc17Q8CE13 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Ccdc17Q8CE13 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc17Q8CE13 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc17Q8CE13 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Ccdc17Q8CE13 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc17Q8CE13 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc17Q8CE13 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc17Q8CE13 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc17Q8CE13 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc17Q8CE13 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.89□□□□□ -0.35
Ccdc17Q8CE13 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.89□□□□□ -0.35
Ccdc17Q8CE13 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.89□□□□□ -0.35
Ccdc17Q8CE13 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Ccdc17Q8CE13 Gm10109-202ENSMUST00000206890 1211 ntBASIC12.89□□□□□ -0.35
Ccdc17Q8CE13 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Ccdc17Q8CE13 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.89□□□□□ -0.35
Ccdc17Q8CE13 Spcs1-203ENSMUST00000226374 592 ntBASIC12.89□□□□□ -0.35
Ccdc17Q8CE13 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc17Q8CE13 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc17Q8CE13 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc17Q8CE13 Mir339-201ENSMUST00000083659 96 ntBASIC12.89□□□□□ -0.35
Ccdc17Q8CE13 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc17Q8CE13 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc17Q8CE13 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Ccdc17Q8CE13 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc17Q8CE13 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc17Q8CE13 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc17Q8CE13 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc17Q8CE13 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms