Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vcpip1Q8CDG3 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC13.31□□□□□ -0.28
Vcpip1Q8CDG3 Ptprm-203ENSMUST00000224091 3773 ntBASIC13.31□□□□□ -0.28
Vcpip1Q8CDG3 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vcpip1Q8CDG3 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.31□□□□□ -0.28
Vcpip1Q8CDG3 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vcpip1Q8CDG3 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vcpip1Q8CDG3 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vcpip1Q8CDG3 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vcpip1Q8CDG3 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vcpip1Q8CDG3 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vcpip1Q8CDG3 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vcpip1Q8CDG3 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vcpip1Q8CDG3 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vcpip1Q8CDG3 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vcpip1Q8CDG3 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vcpip1Q8CDG3 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vcpip1Q8CDG3 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vcpip1Q8CDG3 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vcpip1Q8CDG3 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vcpip1Q8CDG3 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Vcpip1Q8CDG3 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vcpip1Q8CDG3 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vcpip1Q8CDG3 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vcpip1Q8CDG3 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vcpip1Q8CDG3 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vcpip1Q8CDG3 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.3□□□□□ -0.28
Vcpip1Q8CDG3 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vcpip1Q8CDG3 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Vcpip1Q8CDG3 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC13.3□□□□□ -0.28
Vcpip1Q8CDG3 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vcpip1Q8CDG3 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.3□□□□□ -0.28
Vcpip1Q8CDG3 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.3□□□□□ -0.28
Vcpip1Q8CDG3 Gm5187-201ENSMUST00000117317 991 ntBASIC13.3□□□□□ -0.28
Vcpip1Q8CDG3 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Vcpip1Q8CDG3 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vcpip1Q8CDG3 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.3□□□□□ -0.28
Vcpip1Q8CDG3 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Vcpip1Q8CDG3 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC13.3□□□□□ -0.28
Vcpip1Q8CDG3 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vcpip1Q8CDG3 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vcpip1Q8CDG3 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vcpip1Q8CDG3 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vcpip1Q8CDG3 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Vcpip1Q8CDG3 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vcpip1Q8CDG3 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vcpip1Q8CDG3 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vcpip1Q8CDG3 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vcpip1Q8CDG3 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vcpip1Q8CDG3 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vcpip1Q8CDG3 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vcpip1Q8CDG3 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Vcpip1Q8CDG3 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vcpip1Q8CDG3 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.3□□□□□ -0.28
Vcpip1Q8CDG3 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.3□□□□□ -0.28
Vcpip1Q8CDG3 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Vcpip1Q8CDG3 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vcpip1Q8CDG3 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vcpip1Q8CDG3 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.29□□□□□ -0.28
Vcpip1Q8CDG3 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vcpip1Q8CDG3 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Vcpip1Q8CDG3 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Vcpip1Q8CDG3 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.29□□□□□ -0.28
Vcpip1Q8CDG3 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vcpip1Q8CDG3 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vcpip1Q8CDG3 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vcpip1Q8CDG3 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Vcpip1Q8CDG3 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vcpip1Q8CDG3 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vcpip1Q8CDG3 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vcpip1Q8CDG3 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Vcpip1Q8CDG3 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vcpip1Q8CDG3 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC13.29□□□□□ -0.28
Vcpip1Q8CDG3 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Vcpip1Q8CDG3 Gm11964-201ENSMUST00000120982 444 ntBASIC13.29□□□□□ -0.28
Vcpip1Q8CDG3 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.29□□□□□ -0.28
Vcpip1Q8CDG3 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vcpip1Q8CDG3 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vcpip1Q8CDG3 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.29□□□□□ -0.28
Vcpip1Q8CDG3 Ighv1-60-201ENSMUST00000195816 405 ntBASIC13.29□□□□□ -0.28
Vcpip1Q8CDG3 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vcpip1Q8CDG3 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vcpip1Q8CDG3 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.29□□□□□ -0.28
Vcpip1Q8CDG3 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.29□□□□□ -0.28
Vcpip1Q8CDG3 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vcpip1Q8CDG3 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Vcpip1Q8CDG3 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Vcpip1Q8CDG3 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vcpip1Q8CDG3 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Vcpip1Q8CDG3 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vcpip1Q8CDG3 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Vcpip1Q8CDG3 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vcpip1Q8CDG3 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vcpip1Q8CDG3 Gm2238-201ENSMUST00000192074 3669 ntBASIC13.29□□□□□ -0.28
Vcpip1Q8CDG3 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vcpip1Q8CDG3 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vcpip1Q8CDG3 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vcpip1Q8CDG3 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vcpip1Q8CDG3 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vcpip1Q8CDG3 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms