Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp44Q8C2S0 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp44Q8C2S0 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Usp44Q8C2S0 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp44Q8C2S0 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp44Q8C2S0 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp44Q8C2S0 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp44Q8C2S0 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp44Q8C2S0 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp44Q8C2S0 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp44Q8C2S0 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp44Q8C2S0 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Usp44Q8C2S0 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp44Q8C2S0 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Usp44Q8C2S0 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp44Q8C2S0 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.45□□□□□ -0.1
Usp44Q8C2S0 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Usp44Q8C2S0 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp44Q8C2S0 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp44Q8C2S0 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC14.44□□□□□ -0.1
Usp44Q8C2S0 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Usp44Q8C2S0 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp44Q8C2S0 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp44Q8C2S0 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp44Q8C2S0 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Usp44Q8C2S0 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp44Q8C2S0 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC14.44□□□□□ -0.1
Usp44Q8C2S0 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp44Q8C2S0 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp44Q8C2S0 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Usp44Q8C2S0 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp44Q8C2S0 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC14.44□□□□□ -0.1
Usp44Q8C2S0 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC14.44□□□□□ -0.1
Usp44Q8C2S0 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp44Q8C2S0 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Usp44Q8C2S0 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC14.44□□□□□ -0.1
Usp44Q8C2S0 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Usp44Q8C2S0 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC14.44□□□□□ -0.1
Usp44Q8C2S0 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC14.44□□□□□ -0.1
Usp44Q8C2S0 Gm5070-201ENSMUST00000177599 862 ntBASIC14.44□□□□□ -0.1
Usp44Q8C2S0 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC14.44□□□□□ -0.1
Usp44Q8C2S0 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Usp44Q8C2S0 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Usp44Q8C2S0 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp44Q8C2S0 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Usp44Q8C2S0 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC14.44□□□□□ -0.1
Usp44Q8C2S0 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp44Q8C2S0 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp44Q8C2S0 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC14.44□□□□□ -0.1
Usp44Q8C2S0 Gm43447-201ENSMUST00000198471 1535 ntBASIC14.44□□□□□ -0.1
Usp44Q8C2S0 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp44Q8C2S0 AC126444.1-201ENSMUST00000225938 1768 ntBASIC14.44□□□□□ -0.1
Usp44Q8C2S0 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp44Q8C2S0 Gm7104-201ENSMUST00000179741 2532 ntBASIC14.44□□□□□ -0.1
Usp44Q8C2S0 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp44Q8C2S0 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp44Q8C2S0 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp44Q8C2S0 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp44Q8C2S0 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp44Q8C2S0 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp44Q8C2S0 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp44Q8C2S0 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Usp44Q8C2S0 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.43□□□□□ -0.1
Usp44Q8C2S0 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp44Q8C2S0 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Usp44Q8C2S0 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp44Q8C2S0 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp44Q8C2S0 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Usp44Q8C2S0 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp44Q8C2S0 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Usp44Q8C2S0 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp44Q8C2S0 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Usp44Q8C2S0 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Usp44Q8C2S0 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp44Q8C2S0 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC14.43□□□□□ -0.1
Usp44Q8C2S0 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC14.43□□□□□ -0.1
Usp44Q8C2S0 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Usp44Q8C2S0 Gm7584-201ENSMUST00000175829 940 ntBASIC14.43□□□□□ -0.1
Usp44Q8C2S0 Gm43438-201ENSMUST00000198133 379 ntBASIC14.43□□□□□ -0.1
Usp44Q8C2S0 Gm45691-201ENSMUST00000206905 1120 ntBASIC14.43□□□□□ -0.1
Usp44Q8C2S0 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp44Q8C2S0 Zfp125-201ENSMUST00000079237 2488 ntBASIC14.43□□□□□ -0.1
Usp44Q8C2S0 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Usp44Q8C2S0 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp44Q8C2S0 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC14.43□□□□□ -0.1
Usp44Q8C2S0 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp44Q8C2S0 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp44Q8C2S0 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Usp44Q8C2S0 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Usp44Q8C2S0 AC156031.2-201ENSMUST00000213107 3310 ntBASIC14.43□□□□□ -0.1
Usp44Q8C2S0 Gm6015-201ENSMUST00000217493 1586 ntBASIC14.43□□□□□ -0.1
Usp44Q8C2S0 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp44Q8C2S0 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp44Q8C2S0 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Usp44Q8C2S0 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp44Q8C2S0 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp44Q8C2S0 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp44Q8C2S0 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp44Q8C2S0 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp44Q8C2S0 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms