Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smg1Q8BKX6 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Smg1Q8BKX6 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Smg1Q8BKX6 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Smg1Q8BKX6 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC10.18□□□□□ -0.78
Smg1Q8BKX6 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC10.18□□□□□ -0.78
Smg1Q8BKX6 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smg1Q8BKX6 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smg1Q8BKX6 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Smg1Q8BKX6 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Smg1Q8BKX6 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Smg1Q8BKX6 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Smg1Q8BKX6 Gm38228-201ENSMUST00000193169 1293 ntBASIC10.18□□□□□ -0.78
Smg1Q8BKX6 Ighv1-2-201ENSMUST00000195325 378 ntBASIC10.18□□□□□ -0.78
Smg1Q8BKX6 Gm42430-201ENSMUST00000197209 616 ntBASIC10.18□□□□□ -0.78
Smg1Q8BKX6 Gm18561-201ENSMUST00000206027 804 ntBASIC10.18□□□□□ -0.78
Smg1Q8BKX6 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Smg1Q8BKX6 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smg1Q8BKX6 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smg1Q8BKX6 Gm12986-201ENSMUST00000119037 967 ntBASIC10.18□□□□□ -0.78
Smg1Q8BKX6 Gm12736-201ENSMUST00000119330 236 ntBASIC10.18□□□□□ -0.78
Smg1Q8BKX6 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Smg1Q8BKX6 Gm27956-201ENSMUST00000175604 260 ntBASIC10.18□□□□□ -0.78
Smg1Q8BKX6 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Smg1Q8BKX6 Gm38007-201ENSMUST00000192187 313 ntBASIC10.18□□□□□ -0.78
Smg1Q8BKX6 Gm42816-201ENSMUST00000198433 325 ntBASIC10.18□□□□□ -0.78
Smg1Q8BKX6 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC10.18□□□□□ -0.78
Smg1Q8BKX6 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC10.18□□□□□ -0.78
Smg1Q8BKX6 AC129975.1-201ENSMUST00000224816 592 ntBASIC10.18□□□□□ -0.78
Smg1Q8BKX6 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smg1Q8BKX6 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Smg1Q8BKX6 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smg1Q8BKX6 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smg1Q8BKX6 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC10.17□□□□□ -0.78
Smg1Q8BKX6 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smg1Q8BKX6 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Smg1Q8BKX6 Gm11663-201ENSMUST00000117888 290 ntBASIC10.17□□□□□ -0.78
Smg1Q8BKX6 Gm15620-201ENSMUST00000122949 270 ntBASIC10.17□□□□□ -0.78
Smg1Q8BKX6 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC10.17□□□□□ -0.78
Smg1Q8BKX6 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Smg1Q8BKX6 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
Smg1Q8BKX6 Gm8342-201ENSMUST00000209839 757 ntBASIC10.17□□□□□ -0.78
Smg1Q8BKX6 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC10.17□□□□□ -0.78
Smg1Q8BKX6 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC10.17□□□□□ -0.78
Smg1Q8BKX6 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smg1Q8BKX6 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC10.17□□□□□ -0.78
Smg1Q8BKX6 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smg1Q8BKX6 Gm18294-201ENSMUST00000176980 1748 ntBASIC10.17□□□□□ -0.78
Smg1Q8BKX6 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smg1Q8BKX6 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC10.17□□□□□ -0.78
Smg1Q8BKX6 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smg1Q8BKX6 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Smg1Q8BKX6 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Smg1Q8BKX6 Gm45094-201ENSMUST00000207013 617 ntBASIC10.17□□□□□ -0.78
Smg1Q8BKX6 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Smg1Q8BKX6 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smg1Q8BKX6 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Smg1Q8BKX6 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Smg1Q8BKX6 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smg1Q8BKX6 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smg1Q8BKX6 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC10.17□□□□□ -0.78
Smg1Q8BKX6 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Smg1Q8BKX6 Gm43807-201ENSMUST00000200678 1781 ntBASIC10.17□□□□□ -0.78
Smg1Q8BKX6 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC10.17□□□□□ -0.78
Smg1Q8BKX6 Gm4900-201ENSMUST00000222046 1628 ntBASIC10.17□□□□□ -0.78
Smg1Q8BKX6 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC10.17□□□□□ -0.78
Smg1Q8BKX6 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smg1Q8BKX6 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Smg1Q8BKX6 Gm45342-201ENSMUST00000210903 1363 ntBASIC10.17□□□□□ -0.78
Smg1Q8BKX6 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smg1Q8BKX6 Gm15004-201ENSMUST00000119192 630 ntBASIC10.17□□□□□ -0.78
Smg1Q8BKX6 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC10.17□□□□□ -0.78
Smg1Q8BKX6 AC121357.1-201ENSMUST00000227365 608 ntBASIC10.17□□□□□ -0.78
Smg1Q8BKX6 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smg1Q8BKX6 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Smg1Q8BKX6 AC151895.1-201ENSMUST00000219025 1742 ntBASIC10.17□□□□□ -0.78
Smg1Q8BKX6 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smg1Q8BKX6 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smg1Q8BKX6 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smg1Q8BKX6 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Smg1Q8BKX6 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
Smg1Q8BKX6 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Smg1Q8BKX6 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smg1Q8BKX6 Gm2345-201ENSMUST00000193451 589 ntBASIC10.16□□□□□ -0.78
Smg1Q8BKX6 Gm3726-201ENSMUST00000203110 785 ntBASIC10.16□□□□□ -0.78
Smg1Q8BKX6 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC10.16□□□□□ -0.78
Smg1Q8BKX6 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smg1Q8BKX6 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smg1Q8BKX6 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smg1Q8BKX6 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smg1Q8BKX6 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.16□□□□□ -0.78
Smg1Q8BKX6 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Smg1Q8BKX6 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Smg1Q8BKX6 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smg1Q8BKX6 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smg1Q8BKX6 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smg1Q8BKX6 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Smg1Q8BKX6 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC10.16□□□□□ -0.78
Smg1Q8BKX6 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smg1Q8BKX6 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms