Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clrn3Q8BHH8 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clrn3Q8BHH8 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clrn3Q8BHH8 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clrn3Q8BHH8 Gm5124-202ENSMUST00000132683 2083 ntBASIC11.68□□□□□ -0.54
Clrn3Q8BHH8 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.68□□□□□ -0.54
Clrn3Q8BHH8 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.68□□□□□ -0.54
Clrn3Q8BHH8 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Clrn3Q8BHH8 Gm15703-201ENSMUST00000120250 880 ntBASIC11.68□□□□□ -0.54
Clrn3Q8BHH8 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.68□□□□□ -0.54
Clrn3Q8BHH8 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Clrn3Q8BHH8 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.68□□□□□ -0.54
Clrn3Q8BHH8 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Clrn3Q8BHH8 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Clrn3Q8BHH8 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Clrn3Q8BHH8 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.68□□□□□ -0.54
Clrn3Q8BHH8 Gm27514-201ENSMUST00000183692 110 ntBASIC11.68□□□□□ -0.54
Clrn3Q8BHH8 Gm5370-201ENSMUST00000187187 574 ntBASIC11.68□□□□□ -0.54
Clrn3Q8BHH8 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC11.68□□□□□ -0.54
Clrn3Q8BHH8 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.68□□□□□ -0.54
Clrn3Q8BHH8 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Clrn3Q8BHH8 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.68□□□□□ -0.54
Clrn3Q8BHH8 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.68□□□□□ -0.54
Clrn3Q8BHH8 Gm5186-201ENSMUST00000218781 920 ntBASIC11.68□□□□□ -0.54
Clrn3Q8BHH8 Gm45930-201ENSMUST00000221330 292 ntBASIC11.68□□□□□ -0.54
Clrn3Q8BHH8 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clrn3Q8BHH8 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Clrn3Q8BHH8 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clrn3Q8BHH8 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Clrn3Q8BHH8 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clrn3Q8BHH8 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clrn3Q8BHH8 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clrn3Q8BHH8 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.68□□□□□ -0.54
Clrn3Q8BHH8 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clrn3Q8BHH8 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Clrn3Q8BHH8 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.68□□□□□ -0.54
Clrn3Q8BHH8 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clrn3Q8BHH8 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Clrn3Q8BHH8 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Clrn3Q8BHH8 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clrn3Q8BHH8 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clrn3Q8BHH8 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clrn3Q8BHH8 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clrn3Q8BHH8 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.68□□□□□ -0.54
Clrn3Q8BHH8 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clrn3Q8BHH8 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clrn3Q8BHH8 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.67□□□□□ -0.54
Clrn3Q8BHH8 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clrn3Q8BHH8 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clrn3Q8BHH8 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Clrn3Q8BHH8 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clrn3Q8BHH8 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clrn3Q8BHH8 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Clrn3Q8BHH8 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.67□□□□□ -0.54
Clrn3Q8BHH8 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.67□□□□□ -0.54
Clrn3Q8BHH8 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clrn3Q8BHH8 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clrn3Q8BHH8 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clrn3Q8BHH8 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clrn3Q8BHH8 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clrn3Q8BHH8 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.67□□□□□ -0.54
Clrn3Q8BHH8 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clrn3Q8BHH8 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Clrn3Q8BHH8 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Clrn3Q8BHH8 Gm11591-201ENSMUST00000120063 702 ntBASIC11.67□□□□□ -0.54
Clrn3Q8BHH8 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.67□□□□□ -0.54
Clrn3Q8BHH8 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Clrn3Q8BHH8 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.67□□□□□ -0.54
Clrn3Q8BHH8 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.67□□□□□ -0.54
Clrn3Q8BHH8 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.67□□□□□ -0.54
Clrn3Q8BHH8 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.67□□□□□ -0.54
Clrn3Q8BHH8 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.67□□□□□ -0.54
Clrn3Q8BHH8 Gm38092-201ENSMUST00000195600 653 ntBASIC11.67□□□□□ -0.54
Clrn3Q8BHH8 Gm5904-201ENSMUST00000210286 865 ntBASIC11.67□□□□□ -0.54
Clrn3Q8BHH8 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.67□□□□□ -0.54
Clrn3Q8BHH8 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.67□□□□□ -0.54
Clrn3Q8BHH8 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.67□□□□□ -0.54
Clrn3Q8BHH8 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.67□□□□□ -0.54
Clrn3Q8BHH8 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clrn3Q8BHH8 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clrn3Q8BHH8 Gm25857-201ENSMUST00000082788 129 ntBASIC11.67□□□□□ -0.54
Clrn3Q8BHH8 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Clrn3Q8BHH8 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clrn3Q8BHH8 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clrn3Q8BHH8 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Clrn3Q8BHH8 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clrn3Q8BHH8 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clrn3Q8BHH8 Gm10686-201ENSMUST00000215389 3247 ntBASIC11.67□□□□□ -0.54
Clrn3Q8BHH8 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clrn3Q8BHH8 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Clrn3Q8BHH8 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.67□□□□□ -0.54
Clrn3Q8BHH8 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.67□□□□□ -0.54
Clrn3Q8BHH8 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Clrn3Q8BHH8 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clrn3Q8BHH8 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clrn3Q8BHH8 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Clrn3Q8BHH8 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Clrn3Q8BHH8 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.66□□□□□ -0.54
Clrn3Q8BHH8 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clrn3Q8BHH8 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms