Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.94□□□□□ -0.34
Srrm3Q80WV7 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.94□□□□□ -0.34
Srrm3Q80WV7 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Srrm3Q80WV7 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Srrm3Q80WV7 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.94□□□□□ -0.34
Srrm3Q80WV7 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.94□□□□□ -0.34
Srrm3Q80WV7 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Srrm3Q80WV7 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Srrm3Q80WV7 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Srrm3Q80WV7 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Srrm3Q80WV7 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Srrm3Q80WV7 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Srrm3Q80WV7 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Srrm3Q80WV7 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Srrm3Q80WV7 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Srrm3Q80WV7 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Srrm3Q80WV7 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Srrm3Q80WV7 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Srrm3Q80WV7 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Srrm3Q80WV7 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Srrm3Q80WV7 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Srrm3Q80WV7 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Srrm3Q80WV7 Gm13461-201ENSMUST00000120980 662 ntBASIC12.93□□□□□ -0.34
Srrm3Q80WV7 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.93□□□□□ -0.34
Srrm3Q80WV7 Gm26464-201ENSMUST00000157094 305 ntBASIC12.93□□□□□ -0.34
Srrm3Q80WV7 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Srrm3Q80WV7 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
Srrm3Q80WV7 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Srrm3Q80WV7 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.93□□□□□ -0.34
Srrm3Q80WV7 Nsd1-205ENSMUST00000224693 852 ntBASIC12.93□□□□□ -0.34
Srrm3Q80WV7 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Srrm3Q80WV7 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Srrm3Q80WV7 Gm9823-201ENSMUST00000051212 327 ntBASIC12.93□□□□□ -0.34
Srrm3Q80WV7 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Srrm3Q80WV7 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.93□□□□□ -0.34
Srrm3Q80WV7 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Srrm3Q80WV7 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Srrm3Q80WV7 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Srrm3Q80WV7 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Srrm3Q80WV7 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.93□□□□□ -0.34
Srrm3Q80WV7 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Srrm3Q80WV7 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Srrm3Q80WV7 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Srrm3Q80WV7 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.93□□□□□ -0.34
Srrm3Q80WV7 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Srrm3Q80WV7 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Srrm3Q80WV7 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Srrm3Q80WV7 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Srrm3Q80WV7 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Srrm3Q80WV7 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Srrm3Q80WV7 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Srrm3Q80WV7 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Srrm3Q80WV7 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Srrm3Q80WV7 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Srrm3Q80WV7 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.92□□□□□ -0.34
Srrm3Q80WV7 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Srrm3Q80WV7 Gm14921-201ENSMUST00000118643 908 ntBASIC12.92□□□□□ -0.34
Srrm3Q80WV7 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.92□□□□□ -0.34
Srrm3Q80WV7 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Srrm3Q80WV7 Gm22902-201ENSMUST00000158488 302 ntBASIC12.92□□□□□ -0.34
Srrm3Q80WV7 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.92□□□□□ -0.34
Srrm3Q80WV7 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Srrm3Q80WV7 Gm43138-201ENSMUST00000199123 708 ntBASIC12.92□□□□□ -0.34
Srrm3Q80WV7 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.92□□□□□ -0.34
Srrm3Q80WV7 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Srrm3Q80WV7 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.92□□□□□ -0.34
Srrm3Q80WV7 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.92□□□□□ -0.34
Srrm3Q80WV7 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Srrm3Q80WV7 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Srrm3Q80WV7 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Srrm3Q80WV7 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Srrm3Q80WV7 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.92□□□□□ -0.34
Srrm3Q80WV7 Gm26315-201ENSMUST00000083890 321 ntBASIC12.92□□□□□ -0.34
Srrm3Q80WV7 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Srrm3Q80WV7 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Srrm3Q80WV7 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Srrm3Q80WV7 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Srrm3Q80WV7 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Srrm3Q80WV7 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Srrm3Q80WV7 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Srrm3Q80WV7 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Srrm3Q80WV7 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Srrm3Q80WV7 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Srrm3Q80WV7 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Srrm3Q80WV7 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Srrm3Q80WV7 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Srrm3Q80WV7 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Srrm3Q80WV7 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Srrm3Q80WV7 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Srrm3Q80WV7 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Srrm3Q80WV7 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.91□□□□□ -0.34
Srrm3Q80WV7 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.91□□□□□ -0.34
Srrm3Q80WV7 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Srrm3Q80WV7 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Srrm3Q80WV7 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Srrm3Q80WV7 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Srrm3Q80WV7 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.91□□□□□ -0.34
Srrm3Q80WV7 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Srrm3Q80WV7 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Srrm3Q80WV7 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms