Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pif1Q80SX8 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Pif1Q80SX8 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pif1Q80SX8 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Pif1Q80SX8 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pif1Q80SX8 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.53□□□□□ -0.56
Pif1Q80SX8 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pif1Q80SX8 Gm23200-201ENSMUST00000104379 132 ntBASIC11.53□□□□□ -0.56
Pif1Q80SX8 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Pif1Q80SX8 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pif1Q80SX8 Gm11331-201ENSMUST00000119764 288 ntBASIC11.53□□□□□ -0.56
Pif1Q80SX8 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.53□□□□□ -0.56
Pif1Q80SX8 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.53□□□□□ -0.56
Pif1Q80SX8 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.53□□□□□ -0.56
Pif1Q80SX8 Gm43947-201ENSMUST00000203019 959 ntBASIC11.53□□□□□ -0.56
Pif1Q80SX8 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.53□□□□□ -0.56
Pif1Q80SX8 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.53□□□□□ -0.56
Pif1Q80SX8 CT009754.4-201ENSMUST00000221430 565 ntBASIC11.53□□□□□ -0.56
Pif1Q80SX8 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC11.53□□□□□ -0.56
Pif1Q80SX8 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.53□□□□□ -0.56
Pif1Q80SX8 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pif1Q80SX8 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pif1Q80SX8 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.53□□□□□ -0.56
Pif1Q80SX8 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pif1Q80SX8 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pif1Q80SX8 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pif1Q80SX8 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pif1Q80SX8 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pif1Q80SX8 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.53□□□□□ -0.56
Pif1Q80SX8 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pif1Q80SX8 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Pif1Q80SX8 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Pif1Q80SX8 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.53□□□□□ -0.56
Pif1Q80SX8 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pif1Q80SX8 Kif2a-206ENSMUST00000159772 2570 ntTSL 5 BASIC11.53□□□□□ -0.56
Pif1Q80SX8 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pif1Q80SX8 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pif1Q80SX8 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pif1Q80SX8 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pif1Q80SX8 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Pif1Q80SX8 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.52□□□□□ -0.56
Pif1Q80SX8 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pif1Q80SX8 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.52□□□□□ -0.56
Pif1Q80SX8 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.52□□□□□ -0.56
Pif1Q80SX8 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pif1Q80SX8 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.52□□□□□ -0.56
Pif1Q80SX8 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pif1Q80SX8 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.52□□□□□ -0.56
Pif1Q80SX8 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pif1Q80SX8 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Pif1Q80SX8 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pif1Q80SX8 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC11.52□□□□□ -0.57
Pif1Q80SX8 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC11.52□□□□□ -0.57
Pif1Q80SX8 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Pif1Q80SX8 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.52□□□□□ -0.57
Pif1Q80SX8 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.52□□□□□ -0.57
Pif1Q80SX8 Gm22334-201ENSMUST00000158070 133 ntBASIC11.52□□□□□ -0.57
Pif1Q80SX8 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.52□□□□□ -0.57
Pif1Q80SX8 Gm28195-201ENSMUST00000186992 372 ntBASIC11.52□□□□□ -0.57
Pif1Q80SX8 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.52□□□□□ -0.57
Pif1Q80SX8 Gm19087-201ENSMUST00000191430 946 ntBASIC11.52□□□□□ -0.57
Pif1Q80SX8 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pif1Q80SX8 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.52□□□□□ -0.57
Pif1Q80SX8 Gm8959-201ENSMUST00000213150 571 ntBASIC11.52□□□□□ -0.57
Pif1Q80SX8 Gm5178-201ENSMUST00000219380 898 ntBASIC11.52□□□□□ -0.57
Pif1Q80SX8 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pif1Q80SX8 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pif1Q80SX8 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pif1Q80SX8 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pif1Q80SX8 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pif1Q80SX8 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pif1Q80SX8 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.52□□□□□ -0.57
Pif1Q80SX8 Gm37373-201ENSMUST00000194005 2812 ntBASIC11.52□□□□□ -0.57
Pif1Q80SX8 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pif1Q80SX8 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.52□□□□□ -0.57
Pif1Q80SX8 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pif1Q80SX8 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.52□□□□□ -0.57
Pif1Q80SX8 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
Pif1Q80SX8 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pif1Q80SX8 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Pif1Q80SX8 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.52□□□□□ -0.57
Pif1Q80SX8 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pif1Q80SX8 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pif1Q80SX8 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.52□□□□□ -0.57
Pif1Q80SX8 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pif1Q80SX8 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pif1Q80SX8 AC121793.2-201ENSMUST00000217127 2728 ntTSL 5 BASIC11.51□□□□□ -0.57
Pif1Q80SX8 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Pif1Q80SX8 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pif1Q80SX8 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pif1Q80SX8 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pif1Q80SX8 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pif1Q80SX8 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.51□□□□□ -0.57
Pif1Q80SX8 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pif1Q80SX8 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.51□□□□□ -0.57
Pif1Q80SX8 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pif1Q80SX8 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pif1Q80SX8 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.51□□□□□ -0.57
Pif1Q80SX8 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pif1Q80SX8 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms