Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC14.03□□□□□ -0.16
Ddx55Q6ZPL9 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC14.03□□□□□ -0.16
Ddx55Q6ZPL9 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx55Q6ZPL9 Rn7s6-201ENSMUST00000175005 291 ntBASIC14.03□□□□□ -0.16
Ddx55Q6ZPL9 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx55Q6ZPL9 Gm10731-201ENSMUST00000181171 448 ntBASIC14.03□□□□□ -0.16
Ddx55Q6ZPL9 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC14.03□□□□□ -0.16
Ddx55Q6ZPL9 Mir6998-201ENSMUST00000183343 64 ntBASIC14.03□□□□□ -0.16
Ddx55Q6ZPL9 Gm17826-201ENSMUST00000189720 798 ntBASIC14.03□□□□□ -0.16
Ddx55Q6ZPL9 Gm43520-201ENSMUST00000197996 164 ntBASIC14.03□□□□□ -0.16
Ddx55Q6ZPL9 Prrxl1-205ENSMUST00000228878 723 ntBASIC14.03□□□□□ -0.16
Ddx55Q6ZPL9 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx55Q6ZPL9 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx55Q6ZPL9 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx55Q6ZPL9 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC14.03□□□□□ -0.16
Ddx55Q6ZPL9 AC154671.1-201ENSMUST00000228617 1578 ntBASIC14.03□□□□□ -0.16
Ddx55Q6ZPL9 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ddx55Q6ZPL9 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx55Q6ZPL9 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Ddx55Q6ZPL9 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx55Q6ZPL9 Gm6210-201ENSMUST00000204734 1942 ntBASIC14.03□□□□□ -0.16
Ddx55Q6ZPL9 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC14.03□□□□□ -0.16
Ddx55Q6ZPL9 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx55Q6ZPL9 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx55Q6ZPL9 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.03□□□□□ -0.16
Ddx55Q6ZPL9 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx55Q6ZPL9 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx55Q6ZPL9 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.03□□□□□ -0.16
Ddx55Q6ZPL9 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx55Q6ZPL9 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Ddx55Q6ZPL9 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx55Q6ZPL9 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx55Q6ZPL9 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Ddx55Q6ZPL9 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx55Q6ZPL9 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx55Q6ZPL9 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx55Q6ZPL9 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx55Q6ZPL9 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx55Q6ZPL9 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Ddx55Q6ZPL9 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.02□□□□□ -0.16
Ddx55Q6ZPL9 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx55Q6ZPL9 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC14.02□□□□□ -0.16
Ddx55Q6ZPL9 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx55Q6ZPL9 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx55Q6ZPL9 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.02□□□□□ -0.16
Ddx55Q6ZPL9 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx55Q6ZPL9 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx55Q6ZPL9 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx55Q6ZPL9 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx55Q6ZPL9 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Ddx55Q6ZPL9 Gm15566-201ENSMUST00000121130 590 ntBASIC14.02□□□□□ -0.17
Ddx55Q6ZPL9 Gm8737-201ENSMUST00000122208 642 ntBASIC14.02□□□□□ -0.17
Ddx55Q6ZPL9 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx55Q6ZPL9 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx55Q6ZPL9 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx55Q6ZPL9 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC14.02□□□□□ -0.17
Ddx55Q6ZPL9 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx55Q6ZPL9 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx55Q6ZPL9 Gm23045-201ENSMUST00000175041 96 ntBASIC14.02□□□□□ -0.17
Ddx55Q6ZPL9 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx55Q6ZPL9 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC14.02□□□□□ -0.17
Ddx55Q6ZPL9 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC14.02□□□□□ -0.17
Ddx55Q6ZPL9 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC14.02□□□□□ -0.17
Ddx55Q6ZPL9 Gm44711-201ENSMUST00000205414 1264 ntBASIC14.02□□□□□ -0.17
Ddx55Q6ZPL9 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Ddx55Q6ZPL9 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx55Q6ZPL9 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx55Q6ZPL9 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx55Q6ZPL9 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx55Q6ZPL9 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.02□□□□□ -0.17
Ddx55Q6ZPL9 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx55Q6ZPL9 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx55Q6ZPL9 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx55Q6ZPL9 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx55Q6ZPL9 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Ddx55Q6ZPL9 Gm10176-201ENSMUST00000159707 2264 ntBASIC14.02□□□□□ -0.17
Ddx55Q6ZPL9 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx55Q6ZPL9 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx55Q6ZPL9 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx55Q6ZPL9 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx55Q6ZPL9 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx55Q6ZPL9 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx55Q6ZPL9 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx55Q6ZPL9 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx55Q6ZPL9 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Ddx55Q6ZPL9 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx55Q6ZPL9 AC151895.1-201ENSMUST00000219025 1742 ntBASIC14.01□□□□□ -0.17
Ddx55Q6ZPL9 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx55Q6ZPL9 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ddx55Q6ZPL9 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx55Q6ZPL9 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx55Q6ZPL9 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ddx55Q6ZPL9 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx55Q6ZPL9 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx55Q6ZPL9 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx55Q6ZPL9 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Ddx55Q6ZPL9 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx55Q6ZPL9 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx55Q6ZPL9 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx55Q6ZPL9 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms