Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Slx4Q6P1D7 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Slx4Q6P1D7 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Slx4Q6P1D7 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Slx4Q6P1D7 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Slx4Q6P1D7 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slx4Q6P1D7 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
Slx4Q6P1D7 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slx4Q6P1D7 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slx4Q6P1D7 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slx4Q6P1D7 Gm23912-201ENSMUST00000104687 87 ntBASIC18.7■□□□□ 0.58
Slx4Q6P1D7 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slx4Q6P1D7 Gm26134-201ENSMUST00000178484 110 ntBASIC18.7■□□□□ 0.58
Slx4Q6P1D7 Gm19587-201ENSMUST00000191395 545 ntBASIC18.7■□□□□ 0.58
Slx4Q6P1D7 Gm43778-201ENSMUST00000199438 199 ntBASIC18.7■□□□□ 0.58
Slx4Q6P1D7 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Slx4Q6P1D7 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Slx4Q6P1D7 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slx4Q6P1D7 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Slx4Q6P1D7 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slx4Q6P1D7 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slx4Q6P1D7 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
Slx4Q6P1D7 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slx4Q6P1D7 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Slx4Q6P1D7 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Slx4Q6P1D7 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Slx4Q6P1D7 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC18.7■□□□□ 0.58
Slx4Q6P1D7 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slx4Q6P1D7 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slx4Q6P1D7 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC18.69■□□□□ 0.58
Slx4Q6P1D7 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Slx4Q6P1D7 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slx4Q6P1D7 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Slx4Q6P1D7 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slx4Q6P1D7 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slx4Q6P1D7 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC18.69■□□□□ 0.58
Slx4Q6P1D7 Gm14274-201ENSMUST00000117182 615 ntBASIC18.69■□□□□ 0.58
Slx4Q6P1D7 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC18.69■□□□□ 0.58
Slx4Q6P1D7 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Slx4Q6P1D7 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC18.69■□□□□ 0.58
Slx4Q6P1D7 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Slx4Q6P1D7 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC18.69■□□□□ 0.58
Slx4Q6P1D7 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slx4Q6P1D7 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slx4Q6P1D7 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Slx4Q6P1D7 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Slx4Q6P1D7 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slx4Q6P1D7 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slx4Q6P1D7 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slx4Q6P1D7 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slx4Q6P1D7 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slx4Q6P1D7 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Slx4Q6P1D7 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC18.69■□□□□ 0.58
Slx4Q6P1D7 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slx4Q6P1D7 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slx4Q6P1D7 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slx4Q6P1D7 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slx4Q6P1D7 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slx4Q6P1D7 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Slx4Q6P1D7 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slx4Q6P1D7 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Slx4Q6P1D7 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slx4Q6P1D7 Gm11979-201ENSMUST00000119629 743 ntBASIC18.68■□□□□ 0.58
Slx4Q6P1D7 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slx4Q6P1D7 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Slx4Q6P1D7 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Slx4Q6P1D7 Gm44315-201ENSMUST00000203041 219 ntBASIC18.68■□□□□ 0.58
Slx4Q6P1D7 CT009536.2-201ENSMUST00000225370 665 ntBASIC18.68■□□□□ 0.58
Slx4Q6P1D7 AC129308.3-201ENSMUST00000225652 524 ntBASIC18.68■□□□□ 0.58
Slx4Q6P1D7 CT025602.2-201ENSMUST00000226553 772 ntBASIC18.68■□□□□ 0.58
Slx4Q6P1D7 AC165154.1-201ENSMUST00000226661 340 ntBASIC18.68■□□□□ 0.58
Slx4Q6P1D7 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC18.68■□□□□ 0.58
Slx4Q6P1D7 Gm7002-201ENSMUST00000221386 2165 ntBASIC18.68■□□□□ 0.58
Slx4Q6P1D7 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slx4Q6P1D7 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slx4Q6P1D7 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slx4Q6P1D7 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Slx4Q6P1D7 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Slx4Q6P1D7 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Slx4Q6P1D7 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slx4Q6P1D7 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slx4Q6P1D7 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
Slx4Q6P1D7 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slx4Q6P1D7 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC18.68■□□□□ 0.58
Slx4Q6P1D7 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC18.68■□□□□ 0.58
Slx4Q6P1D7 AC113082.1-201ENSMUST00000217324 327 ntBASIC18.68■□□□□ 0.58
Slx4Q6P1D7 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Slx4Q6P1D7 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Slx4Q6P1D7 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC18.68■□□□□ 0.58
Slx4Q6P1D7 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
Slx4Q6P1D7 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC18.68■□□□□ 0.58
Slx4Q6P1D7 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slx4Q6P1D7 Gm44056-201ENSMUST00000204623 1427 ntBASIC18.67■□□□□ 0.58
Slx4Q6P1D7 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slx4Q6P1D7 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Slx4Q6P1D7 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slx4Q6P1D7 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slx4Q6P1D7 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Slx4Q6P1D7 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slx4Q6P1D7 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms