Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
VclQ64727 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
VclQ64727 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
VclQ64727 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.2□□□□□ -0.46
VclQ64727 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
VclQ64727 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
VclQ64727 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
VclQ64727 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
VclQ64727 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
VclQ64727 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
VclQ64727 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
VclQ64727 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
VclQ64727 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
VclQ64727 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.19□□□□□ -0.46
VclQ64727 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.19□□□□□ -0.46
VclQ64727 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VclQ64727 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
VclQ64727 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.19□□□□□ -0.46
VclQ64727 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VclQ64727 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
VclQ64727 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.19□□□□□ -0.46
VclQ64727 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
VclQ64727 Gm25668-201ENSMUST00000157700 129 ntBASIC12.19□□□□□ -0.46
VclQ64727 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VclQ64727 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.19□□□□□ -0.46
VclQ64727 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
VclQ64727 Gm3096-201ENSMUST00000185770 364 ntBASIC12.19□□□□□ -0.46
VclQ64727 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.19□□□□□ -0.46
VclQ64727 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
VclQ64727 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.19□□□□□ -0.46
VclQ64727 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VclQ64727 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VclQ64727 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VclQ64727 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
VclQ64727 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VclQ64727 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VclQ64727 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VclQ64727 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VclQ64727 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VclQ64727 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.19□□□□□ -0.46
VclQ64727 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VclQ64727 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
VclQ64727 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
VclQ64727 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VclQ64727 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
VclQ64727 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VclQ64727 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VclQ64727 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
VclQ64727 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VclQ64727 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VclQ64727 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
VclQ64727 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
VclQ64727 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VclQ64727 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
VclQ64727 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VclQ64727 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
VclQ64727 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.18□□□□□ -0.46
VclQ64727 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VclQ64727 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VclQ64727 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VclQ64727 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VclQ64727 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VclQ64727 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
VclQ64727 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VclQ64727 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
VclQ64727 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.18□□□□□ -0.46
VclQ64727 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.18□□□□□ -0.46
VclQ64727 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.18□□□□□ -0.46
VclQ64727 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VclQ64727 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VclQ64727 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VclQ64727 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
VclQ64727 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.18□□□□□ -0.46
VclQ64727 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
VclQ64727 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
VclQ64727 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
VclQ64727 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VclQ64727 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
VclQ64727 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VclQ64727 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.18□□□□□ -0.46
VclQ64727 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
VclQ64727 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VclQ64727 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.18□□□□□ -0.46
VclQ64727 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.18□□□□□ -0.46
VclQ64727 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VclQ64727 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
VclQ64727 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VclQ64727 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
VclQ64727 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VclQ64727 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VclQ64727 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VclQ64727 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
VclQ64727 Gm25214-201ENSMUST00000104573 129 ntBASIC12.17□□□□□ -0.46
VclQ64727 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VclQ64727 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
VclQ64727 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
VclQ64727 Gm11930-201ENSMUST00000117788 190 ntBASIC12.17□□□□□ -0.46
VclQ64727 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
VclQ64727 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
VclQ64727 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms