Protein–RNA interactions for Protein: Q60688

Foxd4, Forkhead box protein D4, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd4Q60688 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Foxd4Q60688 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Foxd4Q60688 Gm11685-201ENSMUST00000141559 1332 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Foxd4Q60688 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxd4Q60688 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxd4Q60688 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxd4Q60688 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxd4Q60688 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxd4Q60688 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Foxd4Q60688 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Foxd4Q60688 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxd4Q60688 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxd4Q60688 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxd4Q60688 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.11□□□□□ -0.31
Foxd4Q60688 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxd4Q60688 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxd4Q60688 Ctdspl2-203ENSMUST00000110574 1616 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Foxd4Q60688 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Foxd4Q60688 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxd4Q60688 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxd4Q60688 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxd4Q60688 Gm15515-201ENSMUST00000117827 822 ntBASIC13.11□□□□□ -0.31
Foxd4Q60688 Gm14417-201ENSMUST00000120036 1074 ntBASIC13.11□□□□□ -0.31
Foxd4Q60688 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC13.11□□□□□ -0.31
Foxd4Q60688 Gm6182-201ENSMUST00000156439 1208 ntBASIC13.11□□□□□ -0.31
Foxd4Q60688 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC13.11□□□□□ -0.31
Foxd4Q60688 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Foxd4Q60688 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Foxd4Q60688 Gm27701-201ENSMUST00000184498 110 ntBASIC13.11□□□□□ -0.31
Foxd4Q60688 Gm38144-201ENSMUST00000192790 465 ntBASIC13.11□□□□□ -0.31
Foxd4Q60688 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Foxd4Q60688 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.11□□□□□ -0.31
Foxd4Q60688 Gm6007-201ENSMUST00000208170 823 ntBASIC13.11□□□□□ -0.31
Foxd4Q60688 AC154527.3-201ENSMUST00000225519 989 ntBASIC13.11□□□□□ -0.31
Foxd4Q60688 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxd4Q60688 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC13.11□□□□□ -0.31
Foxd4Q60688 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Foxd4Q60688 Zfp850-201ENSMUST00000099111 941 ntBASIC13.11□□□□□ -0.31
Foxd4Q60688 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Foxd4Q60688 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.11□□□□□ -0.31
Foxd4Q60688 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC13.11□□□□□ -0.31
Foxd4Q60688 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxd4Q60688 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxd4Q60688 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxd4Q60688 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxd4Q60688 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxd4Q60688 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxd4Q60688 Gm38368-201ENSMUST00000193181 1335 ntBASIC13.11□□□□□ -0.31
Foxd4Q60688 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxd4Q60688 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxd4Q60688 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.1□□□□□ -0.31
Foxd4Q60688 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Foxd4Q60688 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Foxd4Q60688 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Foxd4Q60688 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Foxd4Q60688 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Foxd4Q60688 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Foxd4Q60688 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Foxd4Q60688 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Foxd4Q60688 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Foxd4Q60688 Gm43075-201ENSMUST00000198613 3905 ntBASIC13.1□□□□□ -0.31
Foxd4Q60688 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Foxd4Q60688 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Foxd4Q60688 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC13.1□□□□□ -0.31
Foxd4Q60688 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Foxd4Q60688 Acss2os-201ENSMUST00000148685 629 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Foxd4Q60688 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC13.1□□□□□ -0.31
Foxd4Q60688 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Foxd4Q60688 Gm27892-201ENSMUST00000185017 106 ntBASIC13.1□□□□□ -0.31
Foxd4Q60688 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC13.1□□□□□ -0.31
Foxd4Q60688 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Foxd4Q60688 Gm38223-201ENSMUST00000194484 695 ntBASIC13.1□□□□□ -0.31
Foxd4Q60688 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Foxd4Q60688 Gm45259-201ENSMUST00000209217 1006 ntBASIC13.1□□□□□ -0.31
Foxd4Q60688 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC13.1□□□□□ -0.31
Foxd4Q60688 AC161250.1-201ENSMUST00000213426 1111 ntBASIC13.1□□□□□ -0.31
Foxd4Q60688 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC13.1□□□□□ -0.31
Foxd4Q60688 AC153532.1-201ENSMUST00000218126 1111 ntBASIC13.1□□□□□ -0.31
Foxd4Q60688 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Foxd4Q60688 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Foxd4Q60688 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Foxd4Q60688 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Foxd4Q60688 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Foxd4Q60688 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Foxd4Q60688 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Foxd4Q60688 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Foxd4Q60688 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Foxd4Q60688 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.1□□□□□ -0.31
Foxd4Q60688 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Foxd4Q60688 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Foxd4Q60688 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Foxd4Q60688 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Foxd4Q60688 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Foxd4Q60688 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Foxd4Q60688 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Foxd4Q60688 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Foxd4Q60688 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Foxd4Q60688 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Foxd4Q60688 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Foxd4Q60688 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms