Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Shroom1Q5SX79 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.19□□□□□ -0.3
Shroom1Q5SX79 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shroom1Q5SX79 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC13.18□□□□□ -0.3
Shroom1Q5SX79 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Shroom1Q5SX79 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.18□□□□□ -0.3
Shroom1Q5SX79 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shroom1Q5SX79 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shroom1Q5SX79 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shroom1Q5SX79 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shroom1Q5SX79 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shroom1Q5SX79 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shroom1Q5SX79 AC122197.2-201ENSMUST00000219196 1635 ntBASIC13.18□□□□□ -0.3
Shroom1Q5SX79 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Shroom1Q5SX79 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shroom1Q5SX79 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shroom1Q5SX79 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shroom1Q5SX79 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Shroom1Q5SX79 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shroom1Q5SX79 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shroom1Q5SX79 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Shroom1Q5SX79 Gm12566-201ENSMUST00000121479 359 ntBASIC13.18□□□□□ -0.3
Shroom1Q5SX79 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC13.18□□□□□ -0.3
Shroom1Q5SX79 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC13.18□□□□□ -0.3
Shroom1Q5SX79 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC13.18□□□□□ -0.3
Shroom1Q5SX79 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.18□□□□□ -0.3
Shroom1Q5SX79 Mir3547-201ENSMUST00000175461 88 ntBASIC13.18□□□□□ -0.3
Shroom1Q5SX79 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.18□□□□□ -0.3
Shroom1Q5SX79 Aprt-ps-201ENSMUST00000212311 505 ntBASIC13.18□□□□□ -0.3
Shroom1Q5SX79 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Shroom1Q5SX79 Gzmn-202ENSMUST00000225535 989 ntBASIC13.18□□□□□ -0.3
Shroom1Q5SX79 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Shroom1Q5SX79 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Shroom1Q5SX79 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shroom1Q5SX79 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shroom1Q5SX79 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Shroom1Q5SX79 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shroom1Q5SX79 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shroom1Q5SX79 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Shroom1Q5SX79 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.18□□□□□ -0.3
Shroom1Q5SX79 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shroom1Q5SX79 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Shroom1Q5SX79 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shroom1Q5SX79 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shroom1Q5SX79 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shroom1Q5SX79 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shroom1Q5SX79 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shroom1Q5SX79 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shroom1Q5SX79 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shroom1Q5SX79 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shroom1Q5SX79 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.17□□□□□ -0.3
Shroom1Q5SX79 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shroom1Q5SX79 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shroom1Q5SX79 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.17□□□□□ -0.3
Shroom1Q5SX79 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shroom1Q5SX79 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shroom1Q5SX79 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shroom1Q5SX79 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Shroom1Q5SX79 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC13.17□□□□□ -0.3
Shroom1Q5SX79 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC13.17□□□□□ -0.3
Shroom1Q5SX79 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Shroom1Q5SX79 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Shroom1Q5SX79 Gm8494-201ENSMUST00000178171 1233 ntBASIC13.17□□□□□ -0.3
Shroom1Q5SX79 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Shroom1Q5SX79 Mir6979-201ENSMUST00000183927 56 ntBASIC13.17□□□□□ -0.3
Shroom1Q5SX79 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC13.17□□□□□ -0.3
Shroom1Q5SX79 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC13.17□□□□□ -0.3
Shroom1Q5SX79 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.17□□□□□ -0.3
Shroom1Q5SX79 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Shroom1Q5SX79 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Shroom1Q5SX79 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Shroom1Q5SX79 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.17□□□□□ -0.3
Shroom1Q5SX79 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shroom1Q5SX79 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shroom1Q5SX79 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shroom1Q5SX79 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
Shroom1Q5SX79 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Shroom1Q5SX79 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shroom1Q5SX79 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Shroom1Q5SX79 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Shroom1Q5SX79 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Shroom1Q5SX79 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shroom1Q5SX79 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Shroom1Q5SX79 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shroom1Q5SX79 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Shroom1Q5SX79 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shroom1Q5SX79 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shroom1Q5SX79 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shroom1Q5SX79 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shroom1Q5SX79 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shroom1Q5SX79 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Shroom1Q5SX79 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Shroom1Q5SX79 Crry-ps-201ENSMUST00000079090 1309 ntBASIC13.16□□□□□ -0.3
Shroom1Q5SX79 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shroom1Q5SX79 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shroom1Q5SX79 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shroom1Q5SX79 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shroom1Q5SX79 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shroom1Q5SX79 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shroom1Q5SX79 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms